Gene : Medtr1g475140 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED Description:  DNA-directed RNA polymerase II subunit Rpb7-like protein
Genomic Order:  4030 Name:  ? Medtr1g475140
Secondary Identifier:  ? PAC:31099935
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g475140 0.5kb upstream 0.5kb upstream 1058 true chr1: 33201326-33202383 Medicago truncatula
Medtr1g475140 0.5kb upstream 0.5kb upstream 500 false chr1: 33201884-33202383 Medicago truncatula
Medtr1g475140 0.5kb downstream 0.5kb downstream 1058 true chr1: 33200826-33201883 Medicago truncatula
Medtr1g475140 0.5kb downstream 0.5kb downstream 500 false chr1: 33200826-33201325 Medicago truncatula
Medtr1g475140 1.0kb upstream 1.0kb upstream 1558 true chr1: 33201326-33202883 Medicago truncatula
Medtr1g475140 1.0kb upstream 1.0kb upstream 1000 false chr1: 33201884-33202883 Medicago truncatula
Medtr1g475140 1.0kb downstream 1.0kb downstream 1558 true chr1: 33200326-33201883 Medicago truncatula
Medtr1g475140 1.0kb downstream 1.0kb downstream 1000 false chr1: 33200326-33201325 Medicago truncatula
Medtr1g475140 2.0kb upstream 2.0kb upstream 2558 true chr1: 33201326-33203883 Medicago truncatula
Medtr1g475140 2.0kb upstream 2.0kb upstream 2000 false chr1: 33201884-33203883 Medicago truncatula
Medtr1g475140 2.0kb downstream 2.0kb downstream 2558 true chr1: 33199326-33201883 Medicago truncatula
Medtr1g475140 2.0kb downstream 2.0kb downstream 2000 false chr1: 33199326-33201325 Medicago truncatula
Medtr1g475140 5.0kb upstream 5.0kb upstream 5558 true chr1: 33201326-33206883 Medicago truncatula
Medtr1g475140 5.0kb upstream 5.0kb upstream 5000 false chr1: 33201884-33206883 Medicago truncatula
Medtr1g475140 5.0kb downstream 5.0kb downstream 5558 true chr1: 33196326-33201883 Medicago truncatula
Medtr1g475140 5.0kb downstream 5.0kb downstream 5000 false chr1: 33196326-33201325 Medicago truncatula
Medtr1g475140 10.0kb upstream 10.0kb upstream 10558 true chr1: 33201326-33211883 Medicago truncatula
Medtr1g475140 10.0kb upstream 10.0kb upstream 10000 false chr1: 33201884-33211883 Medicago truncatula
Medtr1g475140 10.0kb downstream 10.0kb downstream 10558 true chr1: 33191326-33201883 Medicago truncatula
Medtr1g475140 10.0kb downstream 10.0kb downstream 10000 false chr1: 33191326-33201325 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306954 5265 Fabidae View MSA
124061430 5270 Rosid View MSA
123744822 5271 Pentapetalae View MSA
122793544 5272 Eudicot View MSA
122044713 5273 Angiosperm View MSA
121351673 5274 Embryophyte View MSA
123382271 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.755     High Low
cufflinks 55.043     High  
cufflinks 52.325     High  
cufflinks 93.264     High High
cufflinks 74.048     High High
cufflinks 46.331     High  
cufflinks 40.556     High  
cufflinks 56.021     High  
cufflinks 49.897     High  

0 Strain