Gene : Medtr2g005510 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24073:SF484 - RAS-RELATED PROTEIN RABA2B Description:  RAB GTPase-like protein A1D
Genomic Order:  23 Name:  ? Medtr2g005510
Secondary Identifier:  ? PAC:31063657
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g005510 0.5kb upstream 0.5kb upstream 1803 true chr2: 187481-189283 Medicago truncatula
Medtr2g005510 0.5kb upstream 0.5kb upstream 500 false chr2: 188784-189283 Medicago truncatula
Medtr2g005510 0.5kb downstream 0.5kb downstream 1803 true chr2: 186981-188783 Medicago truncatula
Medtr2g005510 0.5kb downstream 0.5kb downstream 500 false chr2: 186981-187480 Medicago truncatula
Medtr2g005510 1.0kb upstream 1.0kb upstream 2303 true chr2: 187481-189783 Medicago truncatula
Medtr2g005510 1.0kb upstream 1.0kb upstream 1000 false chr2: 188784-189783 Medicago truncatula
Medtr2g005510 1.0kb downstream 1.0kb downstream 2303 true chr2: 186481-188783 Medicago truncatula
Medtr2g005510 1.0kb downstream 1.0kb downstream 1000 false chr2: 186481-187480 Medicago truncatula
Medtr2g005510 2.0kb upstream 2.0kb upstream 3303 true chr2: 187481-190783 Medicago truncatula
Medtr2g005510 2.0kb upstream 2.0kb upstream 2000 false chr2: 188784-190783 Medicago truncatula
Medtr2g005510 2.0kb downstream 2.0kb downstream 3303 true chr2: 185481-188783 Medicago truncatula
Medtr2g005510 2.0kb downstream 2.0kb downstream 2000 false chr2: 185481-187480 Medicago truncatula
Medtr2g005510 5.0kb upstream 5.0kb upstream 6303 true chr2: 187481-193783 Medicago truncatula
Medtr2g005510 5.0kb upstream 5.0kb upstream 5000 false chr2: 188784-193783 Medicago truncatula
Medtr2g005510 5.0kb downstream 5.0kb downstream 6303 true chr2: 182481-188783 Medicago truncatula
Medtr2g005510 5.0kb downstream 5.0kb downstream 5000 false chr2: 182481-187480 Medicago truncatula
Medtr2g005510 10.0kb upstream 10.0kb upstream 11303 true chr2: 187481-198783 Medicago truncatula
Medtr2g005510 10.0kb upstream 10.0kb upstream 10000 false chr2: 188784-198783 Medicago truncatula
Medtr2g005510 10.0kb downstream 10.0kb downstream 11303 true chr2: 177481-188783 Medicago truncatula
Medtr2g005510 10.0kb downstream 10.0kb downstream 10000 false chr2: 177481-187480 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299086 5265 Fabidae View MSA
124061309 5270 Rosid View MSA
123744507 5271 Pentapetalae View MSA
122787146 5272 Eudicot View MSA
122050000 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.968       Low
cufflinks 14.166     High  
cufflinks 12.095     High  
cufflinks 18.698     High  
cufflinks 18.22     High  
cufflinks 17.888     High  
cufflinks 6.769        
cufflinks 10.63     High  
cufflinks 23.571     High High

0 Strain