Gene : Medtr1g492940 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21596//PTHR21596:SF14 - RIBONUCLEASE P SUBUNIT P38 Description:  XS domain protein
Genomic Order:  5158 Name:  ? Medtr1g492940
Secondary Identifier:  ? PAC:31095452
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g492940 0.5kb upstream 0.5kb upstream 6247 true chr1: 41677593-41683839 Medicago truncatula
Medtr1g492940 0.5kb upstream 0.5kb upstream 500 false chr1: 41677593-41678092 Medicago truncatula
Medtr1g492940 0.5kb downstream 0.5kb downstream 6247 true chr1: 41678093-41684339 Medicago truncatula
Medtr1g492940 0.5kb downstream 0.5kb downstream 500 false chr1: 41683840-41684339 Medicago truncatula
Medtr1g492940 1.0kb upstream 1.0kb upstream 6747 true chr1: 41677093-41683839 Medicago truncatula
Medtr1g492940 1.0kb upstream 1.0kb upstream 1000 false chr1: 41677093-41678092 Medicago truncatula
Medtr1g492940 1.0kb downstream 1.0kb downstream 6747 true chr1: 41678093-41684839 Medicago truncatula
Medtr1g492940 1.0kb downstream 1.0kb downstream 1000 false chr1: 41683840-41684839 Medicago truncatula
Medtr1g492940 2.0kb upstream 2.0kb upstream 7747 true chr1: 41676093-41683839 Medicago truncatula
Medtr1g492940 2.0kb upstream 2.0kb upstream 2000 false chr1: 41676093-41678092 Medicago truncatula
Medtr1g492940 2.0kb downstream 2.0kb downstream 7747 true chr1: 41678093-41685839 Medicago truncatula
Medtr1g492940 2.0kb downstream 2.0kb downstream 2000 false chr1: 41683840-41685839 Medicago truncatula
Medtr1g492940 5.0kb upstream 5.0kb upstream 10747 true chr1: 41673093-41683839 Medicago truncatula
Medtr1g492940 5.0kb upstream 5.0kb upstream 5000 false chr1: 41673093-41678092 Medicago truncatula
Medtr1g492940 5.0kb downstream 5.0kb downstream 10747 true chr1: 41678093-41688839 Medicago truncatula
Medtr1g492940 5.0kb downstream 5.0kb downstream 5000 false chr1: 41683840-41688839 Medicago truncatula
Medtr1g492940 10.0kb upstream 10.0kb upstream 15747 true chr1: 41668093-41683839 Medicago truncatula
Medtr1g492940 10.0kb upstream 10.0kb upstream 10000 false chr1: 41668093-41678092 Medicago truncatula
Medtr1g492940 10.0kb downstream 10.0kb downstream 15747 true chr1: 41678093-41693839 Medicago truncatula
Medtr1g492940 10.0kb downstream 10.0kb downstream 10000 false chr1: 41683840-41693839 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302905 5265 Fabidae View MSA
124074595 5270 Rosid View MSA
123742746 5271 Pentapetalae View MSA
122795667 5272 Eudicot View MSA
122048757 5273 Angiosperm View MSA
121350622 5274 Embryophyte View MSA
123381820 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.516        
cufflinks 1.45        
cufflinks 2.13       High
cufflinks 0.219       Low
cufflinks 1.817        
cufflinks 0.432        
cufflinks 0.541        
cufflinks 1.593        
cufflinks 0.274       Low

0 Strain