Gene : Medtr2g006100 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21389 - P53 INDUCED PROTEIN Description:  etoposide-induced protein
Genomic Order:  61 Name:  ? Medtr2g006100
Secondary Identifier:  ? PAC:31063864
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g006100 0.5kb upstream 0.5kb upstream 7692 true chr2: 449080-456771 Medicago truncatula
Medtr2g006100 0.5kb upstream 0.5kb upstream 500 false chr2: 449080-449579 Medicago truncatula
Medtr2g006100 0.5kb downstream 0.5kb downstream 7692 true chr2: 449580-457271 Medicago truncatula
Medtr2g006100 0.5kb downstream 0.5kb downstream 500 false chr2: 456772-457271 Medicago truncatula
Medtr2g006100 1.0kb upstream 1.0kb upstream 8192 true chr2: 448580-456771 Medicago truncatula
Medtr2g006100 1.0kb upstream 1.0kb upstream 1000 false chr2: 448580-449579 Medicago truncatula
Medtr2g006100 1.0kb downstream 1.0kb downstream 8192 true chr2: 449580-457771 Medicago truncatula
Medtr2g006100 1.0kb downstream 1.0kb downstream 1000 false chr2: 456772-457771 Medicago truncatula
Medtr2g006100 2.0kb upstream 2.0kb upstream 9192 true chr2: 447580-456771 Medicago truncatula
Medtr2g006100 2.0kb upstream 2.0kb upstream 2000 false chr2: 447580-449579 Medicago truncatula
Medtr2g006100 2.0kb downstream 2.0kb downstream 9192 true chr2: 449580-458771 Medicago truncatula
Medtr2g006100 2.0kb downstream 2.0kb downstream 2000 false chr2: 456772-458771 Medicago truncatula
Medtr2g006100 5.0kb upstream 5.0kb upstream 12192 true chr2: 444580-456771 Medicago truncatula
Medtr2g006100 5.0kb upstream 5.0kb upstream 5000 false chr2: 444580-449579 Medicago truncatula
Medtr2g006100 5.0kb downstream 5.0kb downstream 12192 true chr2: 449580-461771 Medicago truncatula
Medtr2g006100 5.0kb downstream 5.0kb downstream 5000 false chr2: 456772-461771 Medicago truncatula
Medtr2g006100 10.0kb upstream 10.0kb upstream 17192 true chr2: 439580-456771 Medicago truncatula
Medtr2g006100 10.0kb upstream 10.0kb upstream 10000 false chr2: 439580-449579 Medicago truncatula
Medtr2g006100 10.0kb downstream 10.0kb downstream 17192 true chr2: 449580-466771 Medicago truncatula
Medtr2g006100 10.0kb downstream 10.0kb downstream 10000 false chr2: 456772-466771 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300826 5265 Fabidae View MSA
124060748 5270 Rosid View MSA
123747133 5271 Pentapetalae View MSA
122786672 5272 Eudicot View MSA
122041577 5273 Angiosperm View MSA
121347072 5274 Embryophyte View MSA
123425486 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.106        
cufflinks 2.432        
cufflinks 4.223       High
cufflinks 1.682        
cufflinks 2.53        
cufflinks 1.295       Low
cufflinks 2.395        
cufflinks 3.423       High
cufflinks 1.258       Low

0 Strain