Gene : Medtr2g005610 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF01399//PF05470 - PCI domain (PCI) // Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF-3c_N) Description:  eukaryotic translation initiation factor 3 subunit C
Genomic Order:  27 Name:  ? Medtr2g005610
Secondary Identifier:  ? PAC:31063353
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g005610 0.5kb upstream 0.5kb upstream 6533 true chr2: 232948-239480 Medicago truncatula
Medtr2g005610 0.5kb upstream 0.5kb upstream 500 false chr2: 238981-239480 Medicago truncatula
Medtr2g005610 0.5kb downstream 0.5kb downstream 6533 true chr2: 232448-238980 Medicago truncatula
Medtr2g005610 0.5kb downstream 0.5kb downstream 500 false chr2: 232448-232947 Medicago truncatula
Medtr2g005610 1.0kb upstream 1.0kb upstream 7033 true chr2: 232948-239980 Medicago truncatula
Medtr2g005610 1.0kb upstream 1.0kb upstream 1000 false chr2: 238981-239980 Medicago truncatula
Medtr2g005610 1.0kb downstream 1.0kb downstream 7033 true chr2: 231948-238980 Medicago truncatula
Medtr2g005610 1.0kb downstream 1.0kb downstream 1000 false chr2: 231948-232947 Medicago truncatula
Medtr2g005610 2.0kb upstream 2.0kb upstream 8033 true chr2: 232948-240980 Medicago truncatula
Medtr2g005610 2.0kb upstream 2.0kb upstream 2000 false chr2: 238981-240980 Medicago truncatula
Medtr2g005610 2.0kb downstream 2.0kb downstream 8033 true chr2: 230948-238980 Medicago truncatula
Medtr2g005610 2.0kb downstream 2.0kb downstream 2000 false chr2: 230948-232947 Medicago truncatula
Medtr2g005610 5.0kb upstream 5.0kb upstream 11033 true chr2: 232948-243980 Medicago truncatula
Medtr2g005610 5.0kb upstream 5.0kb upstream 5000 false chr2: 238981-243980 Medicago truncatula
Medtr2g005610 5.0kb downstream 5.0kb downstream 11033 true chr2: 227948-238980 Medicago truncatula
Medtr2g005610 5.0kb downstream 5.0kb downstream 5000 false chr2: 227948-232947 Medicago truncatula
Medtr2g005610 10.0kb upstream 10.0kb upstream 16033 true chr2: 232948-248980 Medicago truncatula
Medtr2g005610 10.0kb upstream 10.0kb upstream 10000 false chr2: 238981-248980 Medicago truncatula
Medtr2g005610 10.0kb downstream 10.0kb downstream 16033 true chr2: 222948-238980 Medicago truncatula
Medtr2g005610 10.0kb downstream 10.0kb downstream 10000 false chr2: 222948-232947 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305110 5265 Fabidae View MSA
124064059 5270 Rosid View MSA
123748906 5271 Pentapetalae View MSA
122796222 5272 Eudicot View MSA
122042650 5273 Angiosperm View MSA
121345410 5274 Embryophyte View MSA
123424846 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.525     High High
cufflinks 19.907     High  
cufflinks 25.344     High  
cufflinks 30.324     High  
cufflinks 23.826     High  
cufflinks 14.278     High Low
cufflinks 37.649     High  
cufflinks 23.749     High  
cufflinks 52.968     High High

0 Strain