Gene : Medtr2g006820 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Description:  2-oxoacid dehydrogenase acyltransferase family protein
Genomic Order:  87 Name:  ? Medtr2g006820
Secondary Identifier:  ? PAC:31068634
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5084 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g006820 0.5kb upstream 0.5kb upstream 8739 true chr2: 619028-627766 Medicago truncatula
Medtr2g006820 0.5kb upstream 0.5kb upstream 500 false chr2: 627267-627766 Medicago truncatula
Medtr2g006820 0.5kb downstream 0.5kb downstream 8739 true chr2: 618528-627266 Medicago truncatula
Medtr2g006820 0.5kb downstream 0.5kb downstream 500 false chr2: 618528-619027 Medicago truncatula
Medtr2g006820 1.0kb upstream 1.0kb upstream 9239 true chr2: 619028-628266 Medicago truncatula
Medtr2g006820 1.0kb upstream 1.0kb upstream 1000 false chr2: 627267-628266 Medicago truncatula
Medtr2g006820 1.0kb downstream 1.0kb downstream 9239 true chr2: 618028-627266 Medicago truncatula
Medtr2g006820 1.0kb downstream 1.0kb downstream 1000 false chr2: 618028-619027 Medicago truncatula
Medtr2g006820 2.0kb upstream 2.0kb upstream 10239 true chr2: 619028-629266 Medicago truncatula
Medtr2g006820 2.0kb upstream 2.0kb upstream 2000 false chr2: 627267-629266 Medicago truncatula
Medtr2g006820 2.0kb downstream 2.0kb downstream 10239 true chr2: 617028-627266 Medicago truncatula
Medtr2g006820 2.0kb downstream 2.0kb downstream 2000 false chr2: 617028-619027 Medicago truncatula
Medtr2g006820 5.0kb upstream 5.0kb upstream 13239 true chr2: 619028-632266 Medicago truncatula
Medtr2g006820 5.0kb upstream 5.0kb upstream 5000 false chr2: 627267-632266 Medicago truncatula
Medtr2g006820 5.0kb downstream 5.0kb downstream 13239 true chr2: 614028-627266 Medicago truncatula
Medtr2g006820 5.0kb downstream 5.0kb downstream 5000 false chr2: 614028-619027 Medicago truncatula
Medtr2g006820 10.0kb upstream 10.0kb upstream 18239 true chr2: 619028-637266 Medicago truncatula
Medtr2g006820 10.0kb upstream 10.0kb upstream 10000 false chr2: 627267-637266 Medicago truncatula
Medtr2g006820 10.0kb downstream 10.0kb downstream 18239 true chr2: 609028-627266 Medicago truncatula
Medtr2g006820 10.0kb downstream 10.0kb downstream 10000 false chr2: 609028-619027 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303630 5265 Fabidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.315     High  
cufflinks 9.179        
cufflinks 6.908        
cufflinks 13.131     High  
cufflinks 8.545        
cufflinks 4.896       Low
cufflinks 11.539     High  
cufflinks 7.702        
cufflinks 17.342     High High

0 Strain