Gene : Medtr2g006520 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12832 - TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 Description:  T-complex protein
Genomic Order:  83 Name:  ? Medtr2g006520
Secondary Identifier:  ? PAC:31062806
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g006520 0.5kb upstream 0.5kb upstream 7281 true chr2: 588914-596194 Medicago truncatula
Medtr2g006520 0.5kb upstream 0.5kb upstream 500 false chr2: 595695-596194 Medicago truncatula
Medtr2g006520 0.5kb downstream 0.5kb downstream 7281 true chr2: 588414-595694 Medicago truncatula
Medtr2g006520 0.5kb downstream 0.5kb downstream 500 false chr2: 588414-588913 Medicago truncatula
Medtr2g006520 1.0kb upstream 1.0kb upstream 7781 true chr2: 588914-596694 Medicago truncatula
Medtr2g006520 1.0kb upstream 1.0kb upstream 1000 false chr2: 595695-596694 Medicago truncatula
Medtr2g006520 1.0kb downstream 1.0kb downstream 7781 true chr2: 587914-595694 Medicago truncatula
Medtr2g006520 1.0kb downstream 1.0kb downstream 1000 false chr2: 587914-588913 Medicago truncatula
Medtr2g006520 2.0kb upstream 2.0kb upstream 8781 true chr2: 588914-597694 Medicago truncatula
Medtr2g006520 2.0kb upstream 2.0kb upstream 2000 false chr2: 595695-597694 Medicago truncatula
Medtr2g006520 2.0kb downstream 2.0kb downstream 8781 true chr2: 586914-595694 Medicago truncatula
Medtr2g006520 2.0kb downstream 2.0kb downstream 2000 false chr2: 586914-588913 Medicago truncatula
Medtr2g006520 5.0kb upstream 5.0kb upstream 11781 true chr2: 588914-600694 Medicago truncatula
Medtr2g006520 5.0kb upstream 5.0kb upstream 5000 false chr2: 595695-600694 Medicago truncatula
Medtr2g006520 5.0kb downstream 5.0kb downstream 11781 true chr2: 583914-595694 Medicago truncatula
Medtr2g006520 5.0kb downstream 5.0kb downstream 5000 false chr2: 583914-588913 Medicago truncatula
Medtr2g006520 10.0kb upstream 10.0kb upstream 16781 true chr2: 588914-605694 Medicago truncatula
Medtr2g006520 10.0kb upstream 10.0kb upstream 10000 false chr2: 595695-605694 Medicago truncatula
Medtr2g006520 10.0kb downstream 10.0kb downstream 16781 true chr2: 578914-595694 Medicago truncatula
Medtr2g006520 10.0kb downstream 10.0kb downstream 10000 false chr2: 578914-588913 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308652 5265 Fabidae View MSA
124065811 5270 Rosid View MSA
123746081 5271 Pentapetalae View MSA
122792060 5272 Eudicot View MSA
122043242 5273 Angiosperm View MSA
121345323 5274 Embryophyte View MSA
123426758 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.041     High  
cufflinks 14.973     High Low
cufflinks 25.415     High  
cufflinks 32.268     High  
cufflinks 13.084     High Low
cufflinks 23.844     High  
cufflinks 71.557     High High
cufflinks 18.75     High  
cufflinks 51.946     High High

0 Strain