Gene : Medtr2g007840 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG4414 - COP9 signalosome, subunit CSN8 Description:  COP9 signalosome complex subunit 8
Genomic Order:  165 Name:  ? Medtr2g007840
Secondary Identifier:  ? PAC:31064863
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g007840 0.5kb upstream 0.5kb upstream 4817 true chr2: 1159294-1164110 Medicago truncatula
Medtr2g007840 0.5kb upstream 0.5kb upstream 500 false chr2: 1159294-1159793 Medicago truncatula
Medtr2g007840 0.5kb downstream 0.5kb downstream 4817 true chr2: 1159794-1164610 Medicago truncatula
Medtr2g007840 0.5kb downstream 0.5kb downstream 500 false chr2: 1164111-1164610 Medicago truncatula
Medtr2g007840 1.0kb upstream 1.0kb upstream 5317 true chr2: 1158794-1164110 Medicago truncatula
Medtr2g007840 1.0kb upstream 1.0kb upstream 1000 false chr2: 1158794-1159793 Medicago truncatula
Medtr2g007840 1.0kb downstream 1.0kb downstream 5317 true chr2: 1159794-1165110 Medicago truncatula
Medtr2g007840 1.0kb downstream 1.0kb downstream 1000 false chr2: 1164111-1165110 Medicago truncatula
Medtr2g007840 2.0kb upstream 2.0kb upstream 6317 true chr2: 1157794-1164110 Medicago truncatula
Medtr2g007840 2.0kb upstream 2.0kb upstream 2000 false chr2: 1157794-1159793 Medicago truncatula
Medtr2g007840 2.0kb downstream 2.0kb downstream 6317 true chr2: 1159794-1166110 Medicago truncatula
Medtr2g007840 2.0kb downstream 2.0kb downstream 2000 false chr2: 1164111-1166110 Medicago truncatula
Medtr2g007840 5.0kb upstream 5.0kb upstream 9317 true chr2: 1154794-1164110 Medicago truncatula
Medtr2g007840 5.0kb upstream 5.0kb upstream 5000 false chr2: 1154794-1159793 Medicago truncatula
Medtr2g007840 5.0kb downstream 5.0kb downstream 9317 true chr2: 1159794-1169110 Medicago truncatula
Medtr2g007840 5.0kb downstream 5.0kb downstream 5000 false chr2: 1164111-1169110 Medicago truncatula
Medtr2g007840 10.0kb upstream 10.0kb upstream 14317 true chr2: 1149794-1164110 Medicago truncatula
Medtr2g007840 10.0kb upstream 10.0kb upstream 10000 false chr2: 1149794-1159793 Medicago truncatula
Medtr2g007840 10.0kb downstream 10.0kb downstream 14317 true chr2: 1159794-1174110 Medicago truncatula
Medtr2g007840 10.0kb downstream 10.0kb downstream 10000 false chr2: 1164111-1174110 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304415 5265 Fabidae View MSA
124066881 5270 Rosid View MSA
123740395 5271 Pentapetalae View MSA
122795541 5272 Eudicot View MSA
122042983 5273 Angiosperm View MSA
121348837 5274 Embryophyte View MSA
123425224 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.809       High
cufflinks 2.568        
cufflinks 2.623        
cufflinks 2.903        
cufflinks 2.704        
cufflinks 2.73        
cufflinks 4.053       High
cufflinks 2.429       Low
cufflinks 3.067        

0 Strain