Gene : Medtr2g007800 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12707 - PINN Description:  protein interaction regulator family protein
Genomic Order:  161 Name:  ? Medtr2g007800
Secondary Identifier:  ? PAC:31062097
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g007800 0.5kb upstream 0.5kb upstream 4764 true chr2: 1143049-1147812 Medicago truncatula
Medtr2g007800 0.5kb upstream 0.5kb upstream 500 false chr2: 1143049-1143548 Medicago truncatula
Medtr2g007800 0.5kb downstream 0.5kb downstream 4764 true chr2: 1143549-1148312 Medicago truncatula
Medtr2g007800 0.5kb downstream 0.5kb downstream 500 false chr2: 1147813-1148312 Medicago truncatula
Medtr2g007800 1.0kb upstream 1.0kb upstream 5264 true chr2: 1142549-1147812 Medicago truncatula
Medtr2g007800 1.0kb upstream 1.0kb upstream 1000 false chr2: 1142549-1143548 Medicago truncatula
Medtr2g007800 1.0kb downstream 1.0kb downstream 5264 true chr2: 1143549-1148812 Medicago truncatula
Medtr2g007800 1.0kb downstream 1.0kb downstream 1000 false chr2: 1147813-1148812 Medicago truncatula
Medtr2g007800 2.0kb upstream 2.0kb upstream 6264 true chr2: 1141549-1147812 Medicago truncatula
Medtr2g007800 2.0kb upstream 2.0kb upstream 2000 false chr2: 1141549-1143548 Medicago truncatula
Medtr2g007800 2.0kb downstream 2.0kb downstream 6264 true chr2: 1143549-1149812 Medicago truncatula
Medtr2g007800 2.0kb downstream 2.0kb downstream 2000 false chr2: 1147813-1149812 Medicago truncatula
Medtr2g007800 5.0kb upstream 5.0kb upstream 9264 true chr2: 1138549-1147812 Medicago truncatula
Medtr2g007800 5.0kb upstream 5.0kb upstream 5000 false chr2: 1138549-1143548 Medicago truncatula
Medtr2g007800 5.0kb downstream 5.0kb downstream 9264 true chr2: 1143549-1152812 Medicago truncatula
Medtr2g007800 5.0kb downstream 5.0kb downstream 5000 false chr2: 1147813-1152812 Medicago truncatula
Medtr2g007800 10.0kb upstream 10.0kb upstream 14264 true chr2: 1133549-1147812 Medicago truncatula
Medtr2g007800 10.0kb upstream 10.0kb upstream 10000 false chr2: 1133549-1143548 Medicago truncatula
Medtr2g007800 10.0kb downstream 10.0kb downstream 14264 true chr2: 1143549-1157812 Medicago truncatula
Medtr2g007800 10.0kb downstream 10.0kb downstream 10000 false chr2: 1147813-1157812 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300845 5265 Fabidae View MSA
124061315 5270 Rosid View MSA
123738009 5271 Pentapetalae View MSA
122786181 5272 Eudicot View MSA
122046264 5273 Angiosperm View MSA
121351481 5274 Embryophyte View MSA
123426416 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.707     High  
cufflinks 14.11     High  
cufflinks 18.288     High High
cufflinks 6.512       Low
cufflinks 16.507     High  
cufflinks 4.723       Low
cufflinks 9.699        
cufflinks 16.111     High  
cufflinks 7.408        

0 Strain