Gene : Medtr2g007790 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.4.22.49 - Separase / Separin Description:  separase-like protein
Genomic Order:  160 Name:  ? Medtr2g007790
Secondary Identifier:  ? PAC:31062477
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g007790 0.5kb upstream 0.5kb upstream 19590 true chr2: 1121773-1141362 Medicago truncatula
Medtr2g007790 0.5kb upstream 0.5kb upstream 500 false chr2: 1121773-1122272 Medicago truncatula
Medtr2g007790 0.5kb downstream 0.5kb downstream 19590 true chr2: 1122273-1141862 Medicago truncatula
Medtr2g007790 0.5kb downstream 0.5kb downstream 500 false chr2: 1141363-1141862 Medicago truncatula
Medtr2g007790 1.0kb upstream 1.0kb upstream 20090 true chr2: 1121273-1141362 Medicago truncatula
Medtr2g007790 1.0kb upstream 1.0kb upstream 1000 false chr2: 1121273-1122272 Medicago truncatula
Medtr2g007790 1.0kb downstream 1.0kb downstream 20090 true chr2: 1122273-1142362 Medicago truncatula
Medtr2g007790 1.0kb downstream 1.0kb downstream 1000 false chr2: 1141363-1142362 Medicago truncatula
Medtr2g007790 2.0kb upstream 2.0kb upstream 21090 true chr2: 1120273-1141362 Medicago truncatula
Medtr2g007790 2.0kb upstream 2.0kb upstream 2000 false chr2: 1120273-1122272 Medicago truncatula
Medtr2g007790 2.0kb downstream 2.0kb downstream 21090 true chr2: 1122273-1143362 Medicago truncatula
Medtr2g007790 2.0kb downstream 2.0kb downstream 2000 false chr2: 1141363-1143362 Medicago truncatula
Medtr2g007790 5.0kb upstream 5.0kb upstream 24090 true chr2: 1117273-1141362 Medicago truncatula
Medtr2g007790 5.0kb upstream 5.0kb upstream 5000 false chr2: 1117273-1122272 Medicago truncatula
Medtr2g007790 5.0kb downstream 5.0kb downstream 24090 true chr2: 1122273-1146362 Medicago truncatula
Medtr2g007790 5.0kb downstream 5.0kb downstream 5000 false chr2: 1141363-1146362 Medicago truncatula
Medtr2g007790 10.0kb upstream 10.0kb upstream 29090 true chr2: 1112273-1141362 Medicago truncatula
Medtr2g007790 10.0kb upstream 10.0kb upstream 10000 false chr2: 1112273-1122272 Medicago truncatula
Medtr2g007790 10.0kb downstream 10.0kb downstream 29090 true chr2: 1122273-1151362 Medicago truncatula
Medtr2g007790 10.0kb downstream 10.0kb downstream 10000 false chr2: 1141363-1151362 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300266 5265 Fabidae View MSA
124073860 5270 Rosid View MSA
123739769 5271 Pentapetalae View MSA
122789047 5272 Eudicot View MSA
122049193 5273 Angiosperm View MSA
121346521 5274 Embryophyte View MSA
123380397 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.261       High
cufflinks 0.156        
cufflinks 0.159        
cufflinks 0.052     Low Low
cufflinks 0.219        
cufflinks 0.056     Low Low
cufflinks 0.171        
cufflinks 0.127        
cufflinks 0.186        

0 Strain