Gene : Medtr2g007050 M. truncatula Mt4.0v1
Defline:  (1 of 19) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Description:  PPR containing plant-like protein
Genomic Order:  109 Name:  ? Medtr2g007050
Secondary Identifier:  ? PAC:31063905
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g007050 0.5kb upstream 0.5kb upstream 2709 true chr2: 804631-807339 Medicago truncatula
Medtr2g007050 0.5kb upstream 0.5kb upstream 500 false chr2: 806840-807339 Medicago truncatula
Medtr2g007050 0.5kb downstream 0.5kb downstream 2709 true chr2: 804131-806839 Medicago truncatula
Medtr2g007050 0.5kb downstream 0.5kb downstream 500 false chr2: 804131-804630 Medicago truncatula
Medtr2g007050 1.0kb upstream 1.0kb upstream 3209 true chr2: 804631-807839 Medicago truncatula
Medtr2g007050 1.0kb upstream 1.0kb upstream 1000 false chr2: 806840-807839 Medicago truncatula
Medtr2g007050 1.0kb downstream 1.0kb downstream 3209 true chr2: 803631-806839 Medicago truncatula
Medtr2g007050 1.0kb downstream 1.0kb downstream 1000 false chr2: 803631-804630 Medicago truncatula
Medtr2g007050 2.0kb upstream 2.0kb upstream 4209 true chr2: 804631-808839 Medicago truncatula
Medtr2g007050 2.0kb upstream 2.0kb upstream 2000 false chr2: 806840-808839 Medicago truncatula
Medtr2g007050 2.0kb downstream 2.0kb downstream 4209 true chr2: 802631-806839 Medicago truncatula
Medtr2g007050 2.0kb downstream 2.0kb downstream 2000 false chr2: 802631-804630 Medicago truncatula
Medtr2g007050 5.0kb upstream 5.0kb upstream 7209 true chr2: 804631-811839 Medicago truncatula
Medtr2g007050 5.0kb upstream 5.0kb upstream 5000 false chr2: 806840-811839 Medicago truncatula
Medtr2g007050 5.0kb downstream 5.0kb downstream 7209 true chr2: 799631-806839 Medicago truncatula
Medtr2g007050 5.0kb downstream 5.0kb downstream 5000 false chr2: 799631-804630 Medicago truncatula
Medtr2g007050 10.0kb upstream 10.0kb upstream 12209 true chr2: 804631-816839 Medicago truncatula
Medtr2g007050 10.0kb upstream 10.0kb upstream 10000 false chr2: 806840-816839 Medicago truncatula
Medtr2g007050 10.0kb downstream 10.0kb downstream 12209 true chr2: 794631-806839 Medicago truncatula
Medtr2g007050 10.0kb downstream 10.0kb downstream 10000 false chr2: 794631-804630 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303208 5265 Fabidae View MSA
124064756 5270 Rosid View MSA
123739873 5271 Pentapetalae View MSA
122787306 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.299       High
cufflinks 4.036        
cufflinks 4.852        
cufflinks 1.447       Low
cufflinks 4.436        
cufflinks 1.49       Low
cufflinks 3.776        
cufflinks 4.074        
cufflinks 2.617        

0 Strain