Gene : Medtr2g007030 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  107 Name:  ? Medtr2g007030
Secondary Identifier:  ? PAC:31065927
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g007030 0.5kb upstream 0.5kb upstream 6061 true chr2: 794904-800964 Medicago truncatula
Medtr2g007030 0.5kb upstream 0.5kb upstream 500 false chr2: 800465-800964 Medicago truncatula
Medtr2g007030 0.5kb downstream 0.5kb downstream 6061 true chr2: 794404-800464 Medicago truncatula
Medtr2g007030 0.5kb downstream 0.5kb downstream 500 false chr2: 794404-794903 Medicago truncatula
Medtr2g007030 1.0kb upstream 1.0kb upstream 6561 true chr2: 794904-801464 Medicago truncatula
Medtr2g007030 1.0kb upstream 1.0kb upstream 1000 false chr2: 800465-801464 Medicago truncatula
Medtr2g007030 1.0kb downstream 1.0kb downstream 6561 true chr2: 793904-800464 Medicago truncatula
Medtr2g007030 1.0kb downstream 1.0kb downstream 1000 false chr2: 793904-794903 Medicago truncatula
Medtr2g007030 2.0kb upstream 2.0kb upstream 7561 true chr2: 794904-802464 Medicago truncatula
Medtr2g007030 2.0kb upstream 2.0kb upstream 2000 false chr2: 800465-802464 Medicago truncatula
Medtr2g007030 2.0kb downstream 2.0kb downstream 7561 true chr2: 792904-800464 Medicago truncatula
Medtr2g007030 2.0kb downstream 2.0kb downstream 2000 false chr2: 792904-794903 Medicago truncatula
Medtr2g007030 5.0kb upstream 5.0kb upstream 10561 true chr2: 794904-805464 Medicago truncatula
Medtr2g007030 5.0kb upstream 5.0kb upstream 5000 false chr2: 800465-805464 Medicago truncatula
Medtr2g007030 5.0kb downstream 5.0kb downstream 10561 true chr2: 789904-800464 Medicago truncatula
Medtr2g007030 5.0kb downstream 5.0kb downstream 5000 false chr2: 789904-794903 Medicago truncatula
Medtr2g007030 10.0kb upstream 10.0kb upstream 15561 true chr2: 794904-810464 Medicago truncatula
Medtr2g007030 10.0kb upstream 10.0kb upstream 10000 false chr2: 800465-810464 Medicago truncatula
Medtr2g007030 10.0kb downstream 10.0kb downstream 15561 true chr2: 784904-800464 Medicago truncatula
Medtr2g007030 10.0kb downstream 10.0kb downstream 10000 false chr2: 784904-794903 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041312 5273 Angiosperm View MSA
122299622 5265 Fabidae View MSA
124062430 5270 Rosid View MSA
123750081 5271 Pentapetalae View MSA
122789113 5272 Eudicot View MSA
121347674 5274 Embryophyte View MSA
123380597 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.551        
cufflinks 2.621        
cufflinks 2.966        
cufflinks 0.255        
cufflinks 4.483       High
cufflinks 0.066     Low Low
cufflinks 0.535        
cufflinks 2.584        
cufflinks 0.347        

0 Strain