Gene : Medtr2g008430 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Description:  LL-diaminopimelate aminotransferase
Genomic Order:  212 Name:  ? Medtr2g008430
Secondary Identifier:  ? PAC:31067479
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5097 Medicago truncatula pathologic  
Mtruncatula PWY-724 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g008430 0.5kb upstream 0.5kb upstream 4016 true chr2: 1471385-1475400 Medicago truncatula
Medtr2g008430 0.5kb upstream 0.5kb upstream 500 false chr2: 1471385-1471884 Medicago truncatula
Medtr2g008430 0.5kb downstream 0.5kb downstream 4016 true chr2: 1471885-1475900 Medicago truncatula
Medtr2g008430 0.5kb downstream 0.5kb downstream 500 false chr2: 1475401-1475900 Medicago truncatula
Medtr2g008430 1.0kb upstream 1.0kb upstream 4516 true chr2: 1470885-1475400 Medicago truncatula
Medtr2g008430 1.0kb upstream 1.0kb upstream 1000 false chr2: 1470885-1471884 Medicago truncatula
Medtr2g008430 1.0kb downstream 1.0kb downstream 4516 true chr2: 1471885-1476400 Medicago truncatula
Medtr2g008430 1.0kb downstream 1.0kb downstream 1000 false chr2: 1475401-1476400 Medicago truncatula
Medtr2g008430 2.0kb upstream 2.0kb upstream 5516 true chr2: 1469885-1475400 Medicago truncatula
Medtr2g008430 2.0kb upstream 2.0kb upstream 2000 false chr2: 1469885-1471884 Medicago truncatula
Medtr2g008430 2.0kb downstream 2.0kb downstream 5516 true chr2: 1471885-1477400 Medicago truncatula
Medtr2g008430 2.0kb downstream 2.0kb downstream 2000 false chr2: 1475401-1477400 Medicago truncatula
Medtr2g008430 5.0kb upstream 5.0kb upstream 8516 true chr2: 1466885-1475400 Medicago truncatula
Medtr2g008430 5.0kb upstream 5.0kb upstream 5000 false chr2: 1466885-1471884 Medicago truncatula
Medtr2g008430 5.0kb downstream 5.0kb downstream 8516 true chr2: 1471885-1480400 Medicago truncatula
Medtr2g008430 5.0kb downstream 5.0kb downstream 5000 false chr2: 1475401-1480400 Medicago truncatula
Medtr2g008430 10.0kb upstream 10.0kb upstream 13516 true chr2: 1461885-1475400 Medicago truncatula
Medtr2g008430 10.0kb upstream 10.0kb upstream 10000 false chr2: 1461885-1471884 Medicago truncatula
Medtr2g008430 10.0kb downstream 10.0kb downstream 13516 true chr2: 1471885-1485400 Medicago truncatula
Medtr2g008430 10.0kb downstream 10.0kb downstream 10000 false chr2: 1475401-1485400 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304848 5265 Fabidae View MSA
124072103 5270 Rosid View MSA
123748238 5271 Pentapetalae View MSA
122790748 5272 Eudicot View MSA
122049713 5273 Angiosperm View MSA
121311556 5274 Embryophyte View MSA
123348837 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.063     Low Low
cufflinks 0.562        
cufflinks 0.052     Low Low
cufflinks 0.957        
cufflinks 0.211        
cufflinks 1.164        
cufflinks 2.365        
cufflinks 0.048     Low Low
cufflinks 7.901       High

0 Strain