Gene : Medtr2g007990 M. truncatula Mt4.0v1
Defline:  (1 of 88) PF00892 - EamA-like transporter family (EamA) Description:  auxin-induced 5NG4-like protein
Genomic Order:  177 Name:  ? Medtr2g007990
Secondary Identifier:  ? PAC:31064846
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g007990 0.5kb upstream 0.5kb upstream 4069 true chr2: 1235569-1239637 Medicago truncatula
Medtr2g007990 0.5kb upstream 0.5kb upstream 500 false chr2: 1239138-1239637 Medicago truncatula
Medtr2g007990 0.5kb downstream 0.5kb downstream 4069 true chr2: 1235069-1239137 Medicago truncatula
Medtr2g007990 0.5kb downstream 0.5kb downstream 500 false chr2: 1235069-1235568 Medicago truncatula
Medtr2g007990 1.0kb upstream 1.0kb upstream 4569 true chr2: 1235569-1240137 Medicago truncatula
Medtr2g007990 1.0kb upstream 1.0kb upstream 1000 false chr2: 1239138-1240137 Medicago truncatula
Medtr2g007990 1.0kb downstream 1.0kb downstream 4569 true chr2: 1234569-1239137 Medicago truncatula
Medtr2g007990 1.0kb downstream 1.0kb downstream 1000 false chr2: 1234569-1235568 Medicago truncatula
Medtr2g007990 2.0kb upstream 2.0kb upstream 5569 true chr2: 1235569-1241137 Medicago truncatula
Medtr2g007990 2.0kb upstream 2.0kb upstream 2000 false chr2: 1239138-1241137 Medicago truncatula
Medtr2g007990 2.0kb downstream 2.0kb downstream 5569 true chr2: 1233569-1239137 Medicago truncatula
Medtr2g007990 2.0kb downstream 2.0kb downstream 2000 false chr2: 1233569-1235568 Medicago truncatula
Medtr2g007990 5.0kb upstream 5.0kb upstream 8569 true chr2: 1235569-1244137 Medicago truncatula
Medtr2g007990 5.0kb upstream 5.0kb upstream 5000 false chr2: 1239138-1244137 Medicago truncatula
Medtr2g007990 5.0kb downstream 5.0kb downstream 8569 true chr2: 1230569-1239137 Medicago truncatula
Medtr2g007990 5.0kb downstream 5.0kb downstream 5000 false chr2: 1230569-1235568 Medicago truncatula
Medtr2g007990 10.0kb upstream 10.0kb upstream 13569 true chr2: 1235569-1249137 Medicago truncatula
Medtr2g007990 10.0kb upstream 10.0kb upstream 10000 false chr2: 1239138-1249137 Medicago truncatula
Medtr2g007990 10.0kb downstream 10.0kb downstream 13569 true chr2: 1225569-1239137 Medicago truncatula
Medtr2g007990 10.0kb downstream 10.0kb downstream 10000 false chr2: 1225569-1235568 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313010 5265 Fabidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.352       High
cufflinks 0.866        
cufflinks 0.114        
cufflinks 0.038     Low Low
cufflinks 1.387       High
cufflinks 0.137     Low  
cufflinks 0.37        
cufflinks 0.274        
cufflinks 0.423        

0 Strain