Gene : Medtr2g007960 M. truncatula Mt4.0v1
Defline:  (1 of 88) PF00892 - EamA-like transporter family (EamA) Description:  auxin-induced 5NG4-like protein
Genomic Order:  175 Name:  ? Medtr2g007960
Secondary Identifier:  ? PAC:31069009
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g007960 0.5kb upstream 0.5kb upstream 3176 true chr2: 1213087-1216262 Medicago truncatula
Medtr2g007960 0.5kb upstream 0.5kb upstream 500 false chr2: 1215763-1216262 Medicago truncatula
Medtr2g007960 0.5kb downstream 0.5kb downstream 3176 true chr2: 1212587-1215762 Medicago truncatula
Medtr2g007960 0.5kb downstream 0.5kb downstream 500 false chr2: 1212587-1213086 Medicago truncatula
Medtr2g007960 1.0kb upstream 1.0kb upstream 3676 true chr2: 1213087-1216762 Medicago truncatula
Medtr2g007960 1.0kb upstream 1.0kb upstream 1000 false chr2: 1215763-1216762 Medicago truncatula
Medtr2g007960 1.0kb downstream 1.0kb downstream 3676 true chr2: 1212087-1215762 Medicago truncatula
Medtr2g007960 1.0kb downstream 1.0kb downstream 1000 false chr2: 1212087-1213086 Medicago truncatula
Medtr2g007960 2.0kb upstream 2.0kb upstream 4676 true chr2: 1213087-1217762 Medicago truncatula
Medtr2g007960 2.0kb upstream 2.0kb upstream 2000 false chr2: 1215763-1217762 Medicago truncatula
Medtr2g007960 2.0kb downstream 2.0kb downstream 4676 true chr2: 1211087-1215762 Medicago truncatula
Medtr2g007960 2.0kb downstream 2.0kb downstream 2000 false chr2: 1211087-1213086 Medicago truncatula
Medtr2g007960 5.0kb upstream 5.0kb upstream 7676 true chr2: 1213087-1220762 Medicago truncatula
Medtr2g007960 5.0kb upstream 5.0kb upstream 5000 false chr2: 1215763-1220762 Medicago truncatula
Medtr2g007960 5.0kb downstream 5.0kb downstream 7676 true chr2: 1208087-1215762 Medicago truncatula
Medtr2g007960 5.0kb downstream 5.0kb downstream 5000 false chr2: 1208087-1213086 Medicago truncatula
Medtr2g007960 10.0kb upstream 10.0kb upstream 12676 true chr2: 1213087-1225762 Medicago truncatula
Medtr2g007960 10.0kb upstream 10.0kb upstream 10000 false chr2: 1215763-1225762 Medicago truncatula
Medtr2g007960 10.0kb downstream 10.0kb downstream 12676 true chr2: 1203087-1215762 Medicago truncatula
Medtr2g007960 10.0kb downstream 10.0kb downstream 10000 false chr2: 1203087-1213086 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313010 5265 Fabidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.074        
cufflinks 2.197        
cufflinks 1.414       Low
cufflinks 7.909        
cufflinks 2.385        
cufflinks 2.698        
cufflinks 25.828     High High
cufflinks 1.995        
cufflinks 17.63     High High

0 Strain