Gene : Medtr2g008610 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21649//PTHR21649:SF28 - CHLOROPHYLL A/B BINDING PROTEIN Description:  light-harvesting complex I chlorophyll A/B-binding protein
Genomic Order:  224 Name:  ? Medtr2g008610
Secondary Identifier:  ? PAC:31069086
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g008610 0.5kb upstream 0.5kb upstream 2020 true chr2: 1552450-1554469 Medicago truncatula
Medtr2g008610 0.5kb upstream 0.5kb upstream 500 false chr2: 1552450-1552949 Medicago truncatula
Medtr2g008610 0.5kb downstream 0.5kb downstream 2020 true chr2: 1552950-1554969 Medicago truncatula
Medtr2g008610 0.5kb downstream 0.5kb downstream 500 false chr2: 1554470-1554969 Medicago truncatula
Medtr2g008610 1.0kb upstream 1.0kb upstream 2520 true chr2: 1551950-1554469 Medicago truncatula
Medtr2g008610 1.0kb upstream 1.0kb upstream 1000 false chr2: 1551950-1552949 Medicago truncatula
Medtr2g008610 1.0kb downstream 1.0kb downstream 2520 true chr2: 1552950-1555469 Medicago truncatula
Medtr2g008610 1.0kb downstream 1.0kb downstream 1000 false chr2: 1554470-1555469 Medicago truncatula
Medtr2g008610 2.0kb upstream 2.0kb upstream 3520 true chr2: 1550950-1554469 Medicago truncatula
Medtr2g008610 2.0kb upstream 2.0kb upstream 2000 false chr2: 1550950-1552949 Medicago truncatula
Medtr2g008610 2.0kb downstream 2.0kb downstream 3520 true chr2: 1552950-1556469 Medicago truncatula
Medtr2g008610 2.0kb downstream 2.0kb downstream 2000 false chr2: 1554470-1556469 Medicago truncatula
Medtr2g008610 5.0kb upstream 5.0kb upstream 6520 true chr2: 1547950-1554469 Medicago truncatula
Medtr2g008610 5.0kb upstream 5.0kb upstream 5000 false chr2: 1547950-1552949 Medicago truncatula
Medtr2g008610 5.0kb downstream 5.0kb downstream 6520 true chr2: 1552950-1559469 Medicago truncatula
Medtr2g008610 5.0kb downstream 5.0kb downstream 5000 false chr2: 1554470-1559469 Medicago truncatula
Medtr2g008610 10.0kb upstream 10.0kb upstream 11520 true chr2: 1542950-1554469 Medicago truncatula
Medtr2g008610 10.0kb upstream 10.0kb upstream 10000 false chr2: 1542950-1552949 Medicago truncatula
Medtr2g008610 10.0kb downstream 10.0kb downstream 11520 true chr2: 1552950-1564469 Medicago truncatula
Medtr2g008610 10.0kb downstream 10.0kb downstream 10000 false chr2: 1554470-1564469 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311763 5265 Fabidae View MSA
124068665 5270 Rosid View MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.829        
cufflinks 1091.872     High High
cufflinks 514.228     High  
cufflinks 2.877        
cufflinks 1414.44     High High
cufflinks 0.258       Low
cufflinks 0.631        
cufflinks 938.276     High High
cufflinks 1.62        

0 Strain