Gene : Medtr1g111980 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10954 - RIBONUCLEASE H2 SUBUNIT A Description:  ribonuclease H2 subunit A-like protein
Genomic Order:  6376 Name:  ? Medtr1g111980
Secondary Identifier:  ? PAC:31098184
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g111980 0.5kb upstream 0.5kb upstream 4223 true chr1: 50634901-50639123 Medicago truncatula
Medtr1g111980 0.5kb upstream 0.5kb upstream 500 false chr1: 50634901-50635400 Medicago truncatula
Medtr1g111980 0.5kb downstream 0.5kb downstream 4223 true chr1: 50635401-50639623 Medicago truncatula
Medtr1g111980 0.5kb downstream 0.5kb downstream 500 false chr1: 50639124-50639623 Medicago truncatula
Medtr1g111980 1.0kb upstream 1.0kb upstream 4723 true chr1: 50634401-50639123 Medicago truncatula
Medtr1g111980 1.0kb upstream 1.0kb upstream 1000 false chr1: 50634401-50635400 Medicago truncatula
Medtr1g111980 1.0kb downstream 1.0kb downstream 4723 true chr1: 50635401-50640123 Medicago truncatula
Medtr1g111980 1.0kb downstream 1.0kb downstream 1000 false chr1: 50639124-50640123 Medicago truncatula
Medtr1g111980 2.0kb upstream 2.0kb upstream 5723 true chr1: 50633401-50639123 Medicago truncatula
Medtr1g111980 2.0kb upstream 2.0kb upstream 2000 false chr1: 50633401-50635400 Medicago truncatula
Medtr1g111980 2.0kb downstream 2.0kb downstream 5723 true chr1: 50635401-50641123 Medicago truncatula
Medtr1g111980 2.0kb downstream 2.0kb downstream 2000 false chr1: 50639124-50641123 Medicago truncatula
Medtr1g111980 5.0kb upstream 5.0kb upstream 8723 true chr1: 50630401-50639123 Medicago truncatula
Medtr1g111980 5.0kb upstream 5.0kb upstream 5000 false chr1: 50630401-50635400 Medicago truncatula
Medtr1g111980 5.0kb downstream 5.0kb downstream 8723 true chr1: 50635401-50644123 Medicago truncatula
Medtr1g111980 5.0kb downstream 5.0kb downstream 5000 false chr1: 50639124-50644123 Medicago truncatula
Medtr1g111980 10.0kb upstream 10.0kb upstream 13723 true chr1: 50625401-50639123 Medicago truncatula
Medtr1g111980 10.0kb upstream 10.0kb upstream 10000 false chr1: 50625401-50635400 Medicago truncatula
Medtr1g111980 10.0kb downstream 10.0kb downstream 13723 true chr1: 50635401-50649123 Medicago truncatula
Medtr1g111980 10.0kb downstream 10.0kb downstream 10000 false chr1: 50639124-50649123 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302280 5265 Fabidae View MSA
124069495 5270 Rosid View MSA
123745716 5271 Pentapetalae View MSA
122794048 5272 Eudicot View MSA
122048331 5273 Angiosperm View MSA
121344250 5274 Embryophyte View MSA
123427271 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.29        
cufflinks 0.186        
cufflinks 0.158        
cufflinks 0.263        
cufflinks 0.221        
cufflinks 0.082     Low Low
cufflinks 0.499        
cufflinks 0.134        
cufflinks 0.987       High

0 Strain