Gene : Medtr1g112480 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR20900 - NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT Description:  NADH-ubiquinone oxidoreductase B18 subunit, putative
Genomic Order:  6412 Name:  ? Medtr1g112480
Secondary Identifier:  ? PAC:31100739
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3781 Medicago truncatula pathologic  
Mtruncatula PWY-4302 Medicago truncatula pathologic  
Mtruncatula PWY-5083 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g112480 0.5kb upstream 0.5kb upstream 3616 true chr1: 50916040-50919655 Medicago truncatula
Medtr1g112480 0.5kb upstream 0.5kb upstream 500 false chr1: 50919156-50919655 Medicago truncatula
Medtr1g112480 0.5kb downstream 0.5kb downstream 3616 true chr1: 50915540-50919155 Medicago truncatula
Medtr1g112480 0.5kb downstream 0.5kb downstream 500 false chr1: 50915540-50916039 Medicago truncatula
Medtr1g112480 1.0kb upstream 1.0kb upstream 4116 true chr1: 50916040-50920155 Medicago truncatula
Medtr1g112480 1.0kb upstream 1.0kb upstream 1000 false chr1: 50919156-50920155 Medicago truncatula
Medtr1g112480 1.0kb downstream 1.0kb downstream 4116 true chr1: 50915040-50919155 Medicago truncatula
Medtr1g112480 1.0kb downstream 1.0kb downstream 1000 false chr1: 50915040-50916039 Medicago truncatula
Medtr1g112480 2.0kb upstream 2.0kb upstream 5116 true chr1: 50916040-50921155 Medicago truncatula
Medtr1g112480 2.0kb upstream 2.0kb upstream 2000 false chr1: 50919156-50921155 Medicago truncatula
Medtr1g112480 2.0kb downstream 2.0kb downstream 5116 true chr1: 50914040-50919155 Medicago truncatula
Medtr1g112480 2.0kb downstream 2.0kb downstream 2000 false chr1: 50914040-50916039 Medicago truncatula
Medtr1g112480 5.0kb upstream 5.0kb upstream 8116 true chr1: 50916040-50924155 Medicago truncatula
Medtr1g112480 5.0kb upstream 5.0kb upstream 5000 false chr1: 50919156-50924155 Medicago truncatula
Medtr1g112480 5.0kb downstream 5.0kb downstream 8116 true chr1: 50911040-50919155 Medicago truncatula
Medtr1g112480 5.0kb downstream 5.0kb downstream 5000 false chr1: 50911040-50916039 Medicago truncatula
Medtr1g112480 10.0kb upstream 10.0kb upstream 13116 true chr1: 50916040-50929155 Medicago truncatula
Medtr1g112480 10.0kb upstream 10.0kb upstream 10000 false chr1: 50919156-50929155 Medicago truncatula
Medtr1g112480 10.0kb downstream 10.0kb downstream 13116 true chr1: 50906040-50919155 Medicago truncatula
Medtr1g112480 10.0kb downstream 10.0kb downstream 10000 false chr1: 50906040-50916039 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306225 5265 Fabidae View MSA
124065208 5270 Rosid View MSA
123736664 5271 Pentapetalae View MSA
122789933 5272 Eudicot View MSA
122042996 5273 Angiosperm View MSA
121349349 5274 Embryophyte View MSA
123428564 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.422       Low
cufflinks 11.578     High  
cufflinks 10.638     High  
cufflinks 19.602     High High
cufflinks 11.228     High  
cufflinks 14.947     High  
cufflinks 19.085     High High
cufflinks 11.084     High  
cufflinks 21.509     High High

0 Strain