Gene : Medtr1g112280 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23084:SF119 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 Description:  protein accumulation AND replication OFs protein
Genomic Order:  6398 Name:  ? Medtr1g112280
Secondary Identifier:  ? PAC:31096976
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g112280 0.5kb upstream 0.5kb upstream 9194 true chr1: 50804376-50813569 Medicago truncatula
Medtr1g112280 0.5kb upstream 0.5kb upstream 500 false chr1: 50804376-50804875 Medicago truncatula
Medtr1g112280 0.5kb downstream 0.5kb downstream 9194 true chr1: 50804876-50814069 Medicago truncatula
Medtr1g112280 0.5kb downstream 0.5kb downstream 500 false chr1: 50813570-50814069 Medicago truncatula
Medtr1g112280 1.0kb upstream 1.0kb upstream 9694 true chr1: 50803876-50813569 Medicago truncatula
Medtr1g112280 1.0kb upstream 1.0kb upstream 1000 false chr1: 50803876-50804875 Medicago truncatula
Medtr1g112280 1.0kb downstream 1.0kb downstream 9694 true chr1: 50804876-50814569 Medicago truncatula
Medtr1g112280 1.0kb downstream 1.0kb downstream 1000 false chr1: 50813570-50814569 Medicago truncatula
Medtr1g112280 2.0kb upstream 2.0kb upstream 10694 true chr1: 50802876-50813569 Medicago truncatula
Medtr1g112280 2.0kb upstream 2.0kb upstream 2000 false chr1: 50802876-50804875 Medicago truncatula
Medtr1g112280 2.0kb downstream 2.0kb downstream 10694 true chr1: 50804876-50815569 Medicago truncatula
Medtr1g112280 2.0kb downstream 2.0kb downstream 2000 false chr1: 50813570-50815569 Medicago truncatula
Medtr1g112280 5.0kb upstream 5.0kb upstream 13694 true chr1: 50799876-50813569 Medicago truncatula
Medtr1g112280 5.0kb upstream 5.0kb upstream 5000 false chr1: 50799876-50804875 Medicago truncatula
Medtr1g112280 5.0kb downstream 5.0kb downstream 13694 true chr1: 50804876-50818569 Medicago truncatula
Medtr1g112280 5.0kb downstream 5.0kb downstream 5000 false chr1: 50813570-50818569 Medicago truncatula
Medtr1g112280 10.0kb upstream 10.0kb upstream 18694 true chr1: 50794876-50813569 Medicago truncatula
Medtr1g112280 10.0kb upstream 10.0kb upstream 10000 false chr1: 50794876-50804875 Medicago truncatula
Medtr1g112280 10.0kb downstream 10.0kb downstream 18694 true chr1: 50804876-50823569 Medicago truncatula
Medtr1g112280 10.0kb downstream 10.0kb downstream 10000 false chr1: 50813570-50823569 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303924 5265 Fabidae View MSA
124066570 5270 Rosid View MSA
123740102 5271 Pentapetalae View MSA
122787208 5272 Eudicot View MSA
122045531 5273 Angiosperm View MSA
121346964 5274 Embryophyte View MSA
123427675 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.445        
cufflinks 1.319        
cufflinks 1.535        
cufflinks 0.106       Low
cufflinks 1.86       High
cufflinks 0.181        
cufflinks 0.192        
cufflinks 1.628       High
cufflinks 0.15        

0 Strain