Gene : Medtr1g112870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15184//PTHR15184:SF53 - ATP SYNTHASE Description:  archaeal/vacuolar-type H+-ATPase subunit B
Genomic Order:  6441 Name:  ? Medtr1g112870
Secondary Identifier:  ? PAC:31097910
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g112870 0.5kb upstream 0.5kb upstream 7036 true chr1: 51172727-51179762 Medicago truncatula
Medtr1g112870 0.5kb upstream 0.5kb upstream 500 false chr1: 51172727-51173226 Medicago truncatula
Medtr1g112870 0.5kb downstream 0.5kb downstream 7036 true chr1: 51173227-51180262 Medicago truncatula
Medtr1g112870 0.5kb downstream 0.5kb downstream 500 false chr1: 51179763-51180262 Medicago truncatula
Medtr1g112870 1.0kb upstream 1.0kb upstream 7536 true chr1: 51172227-51179762 Medicago truncatula
Medtr1g112870 1.0kb upstream 1.0kb upstream 1000 false chr1: 51172227-51173226 Medicago truncatula
Medtr1g112870 1.0kb downstream 1.0kb downstream 7536 true chr1: 51173227-51180762 Medicago truncatula
Medtr1g112870 1.0kb downstream 1.0kb downstream 1000 false chr1: 51179763-51180762 Medicago truncatula
Medtr1g112870 2.0kb upstream 2.0kb upstream 8536 true chr1: 51171227-51179762 Medicago truncatula
Medtr1g112870 2.0kb upstream 2.0kb upstream 2000 false chr1: 51171227-51173226 Medicago truncatula
Medtr1g112870 2.0kb downstream 2.0kb downstream 8536 true chr1: 51173227-51181762 Medicago truncatula
Medtr1g112870 2.0kb downstream 2.0kb downstream 2000 false chr1: 51179763-51181762 Medicago truncatula
Medtr1g112870 5.0kb upstream 5.0kb upstream 11536 true chr1: 51168227-51179762 Medicago truncatula
Medtr1g112870 5.0kb upstream 5.0kb upstream 5000 false chr1: 51168227-51173226 Medicago truncatula
Medtr1g112870 5.0kb downstream 5.0kb downstream 11536 true chr1: 51173227-51184762 Medicago truncatula
Medtr1g112870 5.0kb downstream 5.0kb downstream 5000 false chr1: 51179763-51184762 Medicago truncatula
Medtr1g112870 10.0kb upstream 10.0kb upstream 16536 true chr1: 51163227-51179762 Medicago truncatula
Medtr1g112870 10.0kb upstream 10.0kb upstream 10000 false chr1: 51163227-51173226 Medicago truncatula
Medtr1g112870 10.0kb downstream 10.0kb downstream 16536 true chr1: 51173227-51189762 Medicago truncatula
Medtr1g112870 10.0kb downstream 10.0kb downstream 10000 false chr1: 51179763-51189762 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310444 5265 Fabidae View MSA
124071392 5270 Rosid View MSA
123743480 5271 Pentapetalae View MSA
122794276 5272 Eudicot View MSA
122046157 5273 Angiosperm View MSA
121350179 5274 Embryophyte View MSA
123423759 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.896        
cufflinks 10.271     High  
cufflinks 12.39     High  
cufflinks 7.069        
cufflinks 10.599     High  
cufflinks 3.843       Low
cufflinks 8.526        
cufflinks 10.018     High  
cufflinks 12.597     High  

0 Strain