Gene : Medtr1g112950 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Description:  neutral amino acid transporter
Genomic Order:  6449 Name:  ? Medtr1g112950
Secondary Identifier:  ? PAC:31096694
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g112950 0.5kb upstream 0.5kb upstream 1889 true chr1: 51225967-51227855 Medicago truncatula
Medtr1g112950 0.5kb upstream 0.5kb upstream 500 false chr1: 51227356-51227855 Medicago truncatula
Medtr1g112950 0.5kb downstream 0.5kb downstream 1889 true chr1: 51225467-51227355 Medicago truncatula
Medtr1g112950 0.5kb downstream 0.5kb downstream 500 false chr1: 51225467-51225966 Medicago truncatula
Medtr1g112950 1.0kb upstream 1.0kb upstream 2389 true chr1: 51225967-51228355 Medicago truncatula
Medtr1g112950 1.0kb upstream 1.0kb upstream 1000 false chr1: 51227356-51228355 Medicago truncatula
Medtr1g112950 1.0kb downstream 1.0kb downstream 2389 true chr1: 51224967-51227355 Medicago truncatula
Medtr1g112950 1.0kb downstream 1.0kb downstream 1000 false chr1: 51224967-51225966 Medicago truncatula
Medtr1g112950 2.0kb upstream 2.0kb upstream 3389 true chr1: 51225967-51229355 Medicago truncatula
Medtr1g112950 2.0kb upstream 2.0kb upstream 2000 false chr1: 51227356-51229355 Medicago truncatula
Medtr1g112950 2.0kb downstream 2.0kb downstream 3389 true chr1: 51223967-51227355 Medicago truncatula
Medtr1g112950 2.0kb downstream 2.0kb downstream 2000 false chr1: 51223967-51225966 Medicago truncatula
Medtr1g112950 5.0kb upstream 5.0kb upstream 6389 true chr1: 51225967-51232355 Medicago truncatula
Medtr1g112950 5.0kb upstream 5.0kb upstream 5000 false chr1: 51227356-51232355 Medicago truncatula
Medtr1g112950 5.0kb downstream 5.0kb downstream 6389 true chr1: 51220967-51227355 Medicago truncatula
Medtr1g112950 5.0kb downstream 5.0kb downstream 5000 false chr1: 51220967-51225966 Medicago truncatula
Medtr1g112950 10.0kb upstream 10.0kb upstream 11389 true chr1: 51225967-51237355 Medicago truncatula
Medtr1g112950 10.0kb upstream 10.0kb upstream 10000 false chr1: 51227356-51237355 Medicago truncatula
Medtr1g112950 10.0kb downstream 10.0kb downstream 11389 true chr1: 51215967-51227355 Medicago truncatula
Medtr1g112950 10.0kb downstream 10.0kb downstream 10000 false chr1: 51215967-51225966 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309371 5265 Fabidae View MSA
124069812 5270 Rosid View MSA
123742789 5271 Pentapetalae View MSA
122791655 5272 Eudicot View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.048     Low  

0 Strain