Gene : Medtr1g112860 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Description:  transmembrane protein, putative
Genomic Order:  6440 Name:  ? Medtr1g112860
Secondary Identifier:  ? PAC:31100725
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g112860 0.5kb upstream 0.5kb upstream 3919 true chr1: 51157644-51161562 Medicago truncatula
Medtr1g112860 0.5kb upstream 0.5kb upstream 500 false chr1: 51161063-51161562 Medicago truncatula
Medtr1g112860 0.5kb downstream 0.5kb downstream 3919 true chr1: 51157144-51161062 Medicago truncatula
Medtr1g112860 0.5kb downstream 0.5kb downstream 500 false chr1: 51157144-51157643 Medicago truncatula
Medtr1g112860 1.0kb upstream 1.0kb upstream 4419 true chr1: 51157644-51162062 Medicago truncatula
Medtr1g112860 1.0kb upstream 1.0kb upstream 1000 false chr1: 51161063-51162062 Medicago truncatula
Medtr1g112860 1.0kb downstream 1.0kb downstream 4419 true chr1: 51156644-51161062 Medicago truncatula
Medtr1g112860 1.0kb downstream 1.0kb downstream 1000 false chr1: 51156644-51157643 Medicago truncatula
Medtr1g112860 2.0kb upstream 2.0kb upstream 5419 true chr1: 51157644-51163062 Medicago truncatula
Medtr1g112860 2.0kb upstream 2.0kb upstream 2000 false chr1: 51161063-51163062 Medicago truncatula
Medtr1g112860 2.0kb downstream 2.0kb downstream 5419 true chr1: 51155644-51161062 Medicago truncatula
Medtr1g112860 2.0kb downstream 2.0kb downstream 2000 false chr1: 51155644-51157643 Medicago truncatula
Medtr1g112860 5.0kb upstream 5.0kb upstream 8419 true chr1: 51157644-51166062 Medicago truncatula
Medtr1g112860 5.0kb upstream 5.0kb upstream 5000 false chr1: 51161063-51166062 Medicago truncatula
Medtr1g112860 5.0kb downstream 5.0kb downstream 8419 true chr1: 51152644-51161062 Medicago truncatula
Medtr1g112860 5.0kb downstream 5.0kb downstream 5000 false chr1: 51152644-51157643 Medicago truncatula
Medtr1g112860 10.0kb upstream 10.0kb upstream 13419 true chr1: 51157644-51171062 Medicago truncatula
Medtr1g112860 10.0kb upstream 10.0kb upstream 10000 false chr1: 51161063-51171062 Medicago truncatula
Medtr1g112860 10.0kb downstream 10.0kb downstream 13419 true chr1: 51147644-51161062 Medicago truncatula
Medtr1g112860 10.0kb downstream 10.0kb downstream 10000 false chr1: 51147644-51157643 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304624 5265 Fabidae View MSA
124066529 5270 Rosid View MSA
123749118 5271 Pentapetalae View MSA
122786274 5272 Eudicot View MSA
122047398 5273 Angiosperm View MSA
121344434 5274 Embryophyte View MSA
123428691 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.69       Low
cufflinks 8.598       High
cufflinks 7.085        
cufflinks 5.088        
cufflinks 8.198       High
cufflinks 3.254        
cufflinks 2.686       Low
cufflinks 8.066       High
cufflinks 3.1        

0 Strain