Gene : Medtr1g112680 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31945:SF11 - TRANSCRIPTION FACTOR ABORTED MICROSPORES Description:  transcription factor aborted microspores-like protein
Genomic Order:  6426 Name:  ? Medtr1g112680
Secondary Identifier:  ? PAC:31099808
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g112680 0.5kb upstream 0.5kb upstream 3145 true chr1: 51008405-51011549 Medicago truncatula
Medtr1g112680 0.5kb upstream 0.5kb upstream 500 false chr1: 51008405-51008904 Medicago truncatula
Medtr1g112680 0.5kb downstream 0.5kb downstream 3145 true chr1: 51008905-51012049 Medicago truncatula
Medtr1g112680 0.5kb downstream 0.5kb downstream 500 false chr1: 51011550-51012049 Medicago truncatula
Medtr1g112680 1.0kb upstream 1.0kb upstream 3645 true chr1: 51007905-51011549 Medicago truncatula
Medtr1g112680 1.0kb upstream 1.0kb upstream 1000 false chr1: 51007905-51008904 Medicago truncatula
Medtr1g112680 1.0kb downstream 1.0kb downstream 3645 true chr1: 51008905-51012549 Medicago truncatula
Medtr1g112680 1.0kb downstream 1.0kb downstream 1000 false chr1: 51011550-51012549 Medicago truncatula
Medtr1g112680 2.0kb upstream 2.0kb upstream 4645 true chr1: 51006905-51011549 Medicago truncatula
Medtr1g112680 2.0kb upstream 2.0kb upstream 2000 false chr1: 51006905-51008904 Medicago truncatula
Medtr1g112680 2.0kb downstream 2.0kb downstream 4645 true chr1: 51008905-51013549 Medicago truncatula
Medtr1g112680 2.0kb downstream 2.0kb downstream 2000 false chr1: 51011550-51013549 Medicago truncatula
Medtr1g112680 5.0kb upstream 5.0kb upstream 7645 true chr1: 51003905-51011549 Medicago truncatula
Medtr1g112680 5.0kb upstream 5.0kb upstream 5000 false chr1: 51003905-51008904 Medicago truncatula
Medtr1g112680 5.0kb downstream 5.0kb downstream 7645 true chr1: 51008905-51016549 Medicago truncatula
Medtr1g112680 5.0kb downstream 5.0kb downstream 5000 false chr1: 51011550-51016549 Medicago truncatula
Medtr1g112680 10.0kb upstream 10.0kb upstream 12645 true chr1: 50998905-51011549 Medicago truncatula
Medtr1g112680 10.0kb upstream 10.0kb upstream 10000 false chr1: 50998905-51008904 Medicago truncatula
Medtr1g112680 10.0kb downstream 10.0kb downstream 12645 true chr1: 51008905-51021549 Medicago truncatula
Medtr1g112680 10.0kb downstream 10.0kb downstream 10000 false chr1: 51011550-51021549 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041355 5273 Angiosperm View MSA
122309968 5265 Fabidae View MSA
124063868 5270 Rosid View MSA
123741521 5271 Pentapetalae View MSA
122795630 5272 Eudicot View MSA
121343945 5274 Embryophyte View MSA
123379944 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.266       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain