Gene : Medtr1g114250 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13872:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B Description:  oligosaccharyltransferase subunit STT3
Genomic Order:  6495 Name:  ? Medtr1g114250
Secondary Identifier:  ? PAC:31093065
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g114250 0.5kb upstream 0.5kb upstream 9202 true chr1: 51562005-51571206 Medicago truncatula
Medtr1g114250 0.5kb upstream 0.5kb upstream 500 false chr1: 51562005-51562504 Medicago truncatula
Medtr1g114250 0.5kb downstream 0.5kb downstream 9202 true chr1: 51562505-51571706 Medicago truncatula
Medtr1g114250 0.5kb downstream 0.5kb downstream 500 false chr1: 51571207-51571706 Medicago truncatula
Medtr1g114250 1.0kb upstream 1.0kb upstream 9702 true chr1: 51561505-51571206 Medicago truncatula
Medtr1g114250 1.0kb upstream 1.0kb upstream 1000 false chr1: 51561505-51562504 Medicago truncatula
Medtr1g114250 1.0kb downstream 1.0kb downstream 9702 true chr1: 51562505-51572206 Medicago truncatula
Medtr1g114250 1.0kb downstream 1.0kb downstream 1000 false chr1: 51571207-51572206 Medicago truncatula
Medtr1g114250 2.0kb upstream 2.0kb upstream 10702 true chr1: 51560505-51571206 Medicago truncatula
Medtr1g114250 2.0kb upstream 2.0kb upstream 2000 false chr1: 51560505-51562504 Medicago truncatula
Medtr1g114250 2.0kb downstream 2.0kb downstream 10702 true chr1: 51562505-51573206 Medicago truncatula
Medtr1g114250 2.0kb downstream 2.0kb downstream 2000 false chr1: 51571207-51573206 Medicago truncatula
Medtr1g114250 5.0kb upstream 5.0kb upstream 13702 true chr1: 51557505-51571206 Medicago truncatula
Medtr1g114250 5.0kb upstream 5.0kb upstream 5000 false chr1: 51557505-51562504 Medicago truncatula
Medtr1g114250 5.0kb downstream 5.0kb downstream 13702 true chr1: 51562505-51576206 Medicago truncatula
Medtr1g114250 5.0kb downstream 5.0kb downstream 5000 false chr1: 51571207-51576206 Medicago truncatula
Medtr1g114250 10.0kb upstream 10.0kb upstream 18702 true chr1: 51552505-51571206 Medicago truncatula
Medtr1g114250 10.0kb upstream 10.0kb upstream 10000 false chr1: 51552505-51562504 Medicago truncatula
Medtr1g114250 10.0kb downstream 10.0kb downstream 18702 true chr1: 51562505-51581206 Medicago truncatula
Medtr1g114250 10.0kb downstream 10.0kb downstream 10000 false chr1: 51571207-51581206 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041451 5273 Angiosperm View MSA
122299315 5265 Fabidae View MSA
124062338 5270 Rosid View MSA
123739535 5271 Pentapetalae View MSA
122792930 5272 Eudicot View MSA
121345608 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.456        
cufflinks 6.587       High
cufflinks 3.378        
cufflinks 3.658        
cufflinks 7.297       High
cufflinks 1.868       Low
cufflinks 4.787        
cufflinks 3.543        
cufflinks 6.156        

0 Strain