Gene : Medtr1g113850 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31618:SF1 - MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Description:  mechanosensitive ion channel family protein
Genomic Order:  6469 Name:  ? Medtr1g113850
Secondary Identifier:  ? PAC:31094602
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g113850 0.5kb upstream 0.5kb upstream 5194 true chr1: 51363934-51369127 Medicago truncatula
Medtr1g113850 0.5kb upstream 0.5kb upstream 500 false chr1: 51368628-51369127 Medicago truncatula
Medtr1g113850 0.5kb downstream 0.5kb downstream 5194 true chr1: 51363434-51368627 Medicago truncatula
Medtr1g113850 0.5kb downstream 0.5kb downstream 500 false chr1: 51363434-51363933 Medicago truncatula
Medtr1g113850 1.0kb upstream 1.0kb upstream 5694 true chr1: 51363934-51369627 Medicago truncatula
Medtr1g113850 1.0kb upstream 1.0kb upstream 1000 false chr1: 51368628-51369627 Medicago truncatula
Medtr1g113850 1.0kb downstream 1.0kb downstream 5694 true chr1: 51362934-51368627 Medicago truncatula
Medtr1g113850 1.0kb downstream 1.0kb downstream 1000 false chr1: 51362934-51363933 Medicago truncatula
Medtr1g113850 2.0kb upstream 2.0kb upstream 6694 true chr1: 51363934-51370627 Medicago truncatula
Medtr1g113850 2.0kb upstream 2.0kb upstream 2000 false chr1: 51368628-51370627 Medicago truncatula
Medtr1g113850 2.0kb downstream 2.0kb downstream 6694 true chr1: 51361934-51368627 Medicago truncatula
Medtr1g113850 2.0kb downstream 2.0kb downstream 2000 false chr1: 51361934-51363933 Medicago truncatula
Medtr1g113850 5.0kb upstream 5.0kb upstream 9694 true chr1: 51363934-51373627 Medicago truncatula
Medtr1g113850 5.0kb upstream 5.0kb upstream 5000 false chr1: 51368628-51373627 Medicago truncatula
Medtr1g113850 5.0kb downstream 5.0kb downstream 9694 true chr1: 51358934-51368627 Medicago truncatula
Medtr1g113850 5.0kb downstream 5.0kb downstream 5000 false chr1: 51358934-51363933 Medicago truncatula
Medtr1g113850 10.0kb upstream 10.0kb upstream 14694 true chr1: 51363934-51378627 Medicago truncatula
Medtr1g113850 10.0kb upstream 10.0kb upstream 10000 false chr1: 51368628-51378627 Medicago truncatula
Medtr1g113850 10.0kb downstream 10.0kb downstream 14694 true chr1: 51353934-51368627 Medicago truncatula
Medtr1g113850 10.0kb downstream 10.0kb downstream 10000 false chr1: 51353934-51363933 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300423 5265 Fabidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.64       High
cufflinks 4.386        
cufflinks 5.8        
cufflinks 1.171       Low
cufflinks 3.125        
cufflinks 4.534        
cufflinks 6.195        
cufflinks 5.208        
cufflinks 8.319        

0 Strain