Gene : Medtr1g112990 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR20922:SF15 - A_TM021B04.14 PROTEIN Description:  DNL zinc finger protein
Genomic Order:  6453 Name:  ? Medtr1g112990
Secondary Identifier:  ? PAC:31093337
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g112990 0.5kb upstream 0.5kb upstream 3206 true chr1: 51260254-51263459 Medicago truncatula
Medtr1g112990 0.5kb upstream 0.5kb upstream 500 false chr1: 51262960-51263459 Medicago truncatula
Medtr1g112990 0.5kb downstream 0.5kb downstream 3206 true chr1: 51259754-51262959 Medicago truncatula
Medtr1g112990 0.5kb downstream 0.5kb downstream 500 false chr1: 51259754-51260253 Medicago truncatula
Medtr1g112990 1.0kb upstream 1.0kb upstream 3706 true chr1: 51260254-51263959 Medicago truncatula
Medtr1g112990 1.0kb upstream 1.0kb upstream 1000 false chr1: 51262960-51263959 Medicago truncatula
Medtr1g112990 1.0kb downstream 1.0kb downstream 3706 true chr1: 51259254-51262959 Medicago truncatula
Medtr1g112990 1.0kb downstream 1.0kb downstream 1000 false chr1: 51259254-51260253 Medicago truncatula
Medtr1g112990 2.0kb upstream 2.0kb upstream 4706 true chr1: 51260254-51264959 Medicago truncatula
Medtr1g112990 2.0kb upstream 2.0kb upstream 2000 false chr1: 51262960-51264959 Medicago truncatula
Medtr1g112990 2.0kb downstream 2.0kb downstream 4706 true chr1: 51258254-51262959 Medicago truncatula
Medtr1g112990 2.0kb downstream 2.0kb downstream 2000 false chr1: 51258254-51260253 Medicago truncatula
Medtr1g112990 5.0kb upstream 5.0kb upstream 7706 true chr1: 51260254-51267959 Medicago truncatula
Medtr1g112990 5.0kb upstream 5.0kb upstream 5000 false chr1: 51262960-51267959 Medicago truncatula
Medtr1g112990 5.0kb downstream 5.0kb downstream 7706 true chr1: 51255254-51262959 Medicago truncatula
Medtr1g112990 5.0kb downstream 5.0kb downstream 5000 false chr1: 51255254-51260253 Medicago truncatula
Medtr1g112990 10.0kb upstream 10.0kb upstream 12706 true chr1: 51260254-51272959 Medicago truncatula
Medtr1g112990 10.0kb upstream 10.0kb upstream 10000 false chr1: 51262960-51272959 Medicago truncatula
Medtr1g112990 10.0kb downstream 10.0kb downstream 12706 true chr1: 51250254-51262959 Medicago truncatula
Medtr1g112990 10.0kb downstream 10.0kb downstream 10000 false chr1: 51250254-51260253 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306935 5265 Fabidae View MSA
124065926 5270 Rosid View MSA
123752849 5271 Pentapetalae View MSA
122787585 5272 Eudicot View MSA
122042389 5273 Angiosperm View MSA
121347257 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.493     High  
cufflinks 22.007     High  
cufflinks 33.439     High High
cufflinks 15.783     High  
cufflinks 28.683     High High
cufflinks 8.426       Low
cufflinks 14.763     High  
cufflinks 23.589     High  
cufflinks 9.602       Low

0 Strain