Gene : Medtr1g115215 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED Description:  chromatin remodeling protein
Genomic Order:  6546 Name:  ? Medtr1g115215
Secondary Identifier:  ? PAC:31094746
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g115215 0.5kb upstream 0.5kb upstream 10775 true chr1: 51882725-51893499 Medicago truncatula
Medtr1g115215 0.5kb upstream 0.5kb upstream 500 false chr1: 51893000-51893499 Medicago truncatula
Medtr1g115215 0.5kb downstream 0.5kb downstream 10775 true chr1: 51882225-51892999 Medicago truncatula
Medtr1g115215 0.5kb downstream 0.5kb downstream 500 false chr1: 51882225-51882724 Medicago truncatula
Medtr1g115215 1.0kb upstream 1.0kb upstream 11275 true chr1: 51882725-51893999 Medicago truncatula
Medtr1g115215 1.0kb upstream 1.0kb upstream 1000 false chr1: 51893000-51893999 Medicago truncatula
Medtr1g115215 1.0kb downstream 1.0kb downstream 11275 true chr1: 51881725-51892999 Medicago truncatula
Medtr1g115215 1.0kb downstream 1.0kb downstream 1000 false chr1: 51881725-51882724 Medicago truncatula
Medtr1g115215 2.0kb upstream 2.0kb upstream 12275 true chr1: 51882725-51894999 Medicago truncatula
Medtr1g115215 2.0kb upstream 2.0kb upstream 2000 false chr1: 51893000-51894999 Medicago truncatula
Medtr1g115215 2.0kb downstream 2.0kb downstream 12275 true chr1: 51880725-51892999 Medicago truncatula
Medtr1g115215 2.0kb downstream 2.0kb downstream 2000 false chr1: 51880725-51882724 Medicago truncatula
Medtr1g115215 5.0kb upstream 5.0kb upstream 15275 true chr1: 51882725-51897999 Medicago truncatula
Medtr1g115215 5.0kb upstream 5.0kb upstream 5000 false chr1: 51893000-51897999 Medicago truncatula
Medtr1g115215 5.0kb downstream 5.0kb downstream 15275 true chr1: 51877725-51892999 Medicago truncatula
Medtr1g115215 5.0kb downstream 5.0kb downstream 5000 false chr1: 51877725-51882724 Medicago truncatula
Medtr1g115215 10.0kb upstream 10.0kb upstream 20275 true chr1: 51882725-51902999 Medicago truncatula
Medtr1g115215 10.0kb upstream 10.0kb upstream 10000 false chr1: 51893000-51902999 Medicago truncatula
Medtr1g115215 10.0kb downstream 10.0kb downstream 20275 true chr1: 51872725-51892999 Medicago truncatula
Medtr1g115215 10.0kb downstream 10.0kb downstream 10000 false chr1: 51872725-51882724 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307492 5265 Fabidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.422        
cufflinks 3.529        
cufflinks 4.366        
cufflinks 1.056       Low
cufflinks 4.159        
cufflinks 0.779       Low
cufflinks 1.811        
cufflinks 3.882        
cufflinks 1.363        

0 Strain