Gene : Medtr1g115415 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13068:SF8 - EXPRESSED PROTEIN Description:  transcription termination factor family protein
Genomic Order:  6579 Name:  ? Medtr1g115415
Secondary Identifier:  ? PAC:31093902
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g115415 0.5kb upstream 0.5kb upstream 2135 true chr1: 52107512-52109646 Medicago truncatula
Medtr1g115415 0.5kb upstream 0.5kb upstream 500 false chr1: 52109147-52109646 Medicago truncatula
Medtr1g115415 0.5kb downstream 0.5kb downstream 2135 true chr1: 52107012-52109146 Medicago truncatula
Medtr1g115415 0.5kb downstream 0.5kb downstream 500 false chr1: 52107012-52107511 Medicago truncatula
Medtr1g115415 1.0kb upstream 1.0kb upstream 2635 true chr1: 52107512-52110146 Medicago truncatula
Medtr1g115415 1.0kb upstream 1.0kb upstream 1000 false chr1: 52109147-52110146 Medicago truncatula
Medtr1g115415 1.0kb downstream 1.0kb downstream 2635 true chr1: 52106512-52109146 Medicago truncatula
Medtr1g115415 1.0kb downstream 1.0kb downstream 1000 false chr1: 52106512-52107511 Medicago truncatula
Medtr1g115415 2.0kb upstream 2.0kb upstream 3635 true chr1: 52107512-52111146 Medicago truncatula
Medtr1g115415 2.0kb upstream 2.0kb upstream 2000 false chr1: 52109147-52111146 Medicago truncatula
Medtr1g115415 2.0kb downstream 2.0kb downstream 3635 true chr1: 52105512-52109146 Medicago truncatula
Medtr1g115415 2.0kb downstream 2.0kb downstream 2000 false chr1: 52105512-52107511 Medicago truncatula
Medtr1g115415 5.0kb upstream 5.0kb upstream 6635 true chr1: 52107512-52114146 Medicago truncatula
Medtr1g115415 5.0kb upstream 5.0kb upstream 5000 false chr1: 52109147-52114146 Medicago truncatula
Medtr1g115415 5.0kb downstream 5.0kb downstream 6635 true chr1: 52102512-52109146 Medicago truncatula
Medtr1g115415 5.0kb downstream 5.0kb downstream 5000 false chr1: 52102512-52107511 Medicago truncatula
Medtr1g115415 10.0kb upstream 10.0kb upstream 11635 true chr1: 52107512-52119146 Medicago truncatula
Medtr1g115415 10.0kb upstream 10.0kb upstream 10000 false chr1: 52109147-52119146 Medicago truncatula
Medtr1g115415 10.0kb downstream 10.0kb downstream 11635 true chr1: 52097512-52109146 Medicago truncatula
Medtr1g115415 10.0kb downstream 10.0kb downstream 10000 false chr1: 52097512-52107511 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301903 5265 Fabidae View MSA
124066274 5270 Rosid View MSA
123737685 5271 Pentapetalae View MSA
122791060 5272 Eudicot View MSA
122041576 5273 Angiosperm View MSA
121347791 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.573        
cufflinks 3.538        
cufflinks 3.986        
cufflinks 1.123       Low
cufflinks 5.401       High
cufflinks 0.927       Low
cufflinks 1.781        
cufflinks 3.366        
cufflinks 1.396        

0 Strain