Gene : Medtr1g115340 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring) / Oxoglutarate dehydrogenase (lipoamide) Description:  E1 subunit-like 2-oxoglutarate dehydrogenase
Genomic Order:  6568 Name:  ? Medtr1g115340
Secondary Identifier:  ? PAC:31095555
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5084 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g115340 0.5kb upstream 0.5kb upstream 6506 true chr1: 52044156-52050661 Medicago truncatula
Medtr1g115340 0.5kb upstream 0.5kb upstream 500 false chr1: 52044156-52044655 Medicago truncatula
Medtr1g115340 0.5kb downstream 0.5kb downstream 6506 true chr1: 52044656-52051161 Medicago truncatula
Medtr1g115340 0.5kb downstream 0.5kb downstream 500 false chr1: 52050662-52051161 Medicago truncatula
Medtr1g115340 1.0kb upstream 1.0kb upstream 7006 true chr1: 52043656-52050661 Medicago truncatula
Medtr1g115340 1.0kb upstream 1.0kb upstream 1000 false chr1: 52043656-52044655 Medicago truncatula
Medtr1g115340 1.0kb downstream 1.0kb downstream 7006 true chr1: 52044656-52051661 Medicago truncatula
Medtr1g115340 1.0kb downstream 1.0kb downstream 1000 false chr1: 52050662-52051661 Medicago truncatula
Medtr1g115340 2.0kb upstream 2.0kb upstream 8006 true chr1: 52042656-52050661 Medicago truncatula
Medtr1g115340 2.0kb upstream 2.0kb upstream 2000 false chr1: 52042656-52044655 Medicago truncatula
Medtr1g115340 2.0kb downstream 2.0kb downstream 8006 true chr1: 52044656-52052661 Medicago truncatula
Medtr1g115340 2.0kb downstream 2.0kb downstream 2000 false chr1: 52050662-52052661 Medicago truncatula
Medtr1g115340 5.0kb upstream 5.0kb upstream 11006 true chr1: 52039656-52050661 Medicago truncatula
Medtr1g115340 5.0kb upstream 5.0kb upstream 5000 false chr1: 52039656-52044655 Medicago truncatula
Medtr1g115340 5.0kb downstream 5.0kb downstream 11006 true chr1: 52044656-52055661 Medicago truncatula
Medtr1g115340 5.0kb downstream 5.0kb downstream 5000 false chr1: 52050662-52055661 Medicago truncatula
Medtr1g115340 10.0kb upstream 10.0kb upstream 16006 true chr1: 52034656-52050661 Medicago truncatula
Medtr1g115340 10.0kb upstream 10.0kb upstream 10000 false chr1: 52034656-52044655 Medicago truncatula
Medtr1g115340 10.0kb downstream 10.0kb downstream 16006 true chr1: 52044656-52060661 Medicago truncatula
Medtr1g115340 10.0kb downstream 10.0kb downstream 10000 false chr1: 52050662-52060661 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311789 5265 Fabidae View MSA
124067534 5270 Rosid View MSA
123744941 5271 Pentapetalae View MSA
122793820 5272 Eudicot View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.3        
cufflinks 0.303        
cufflinks 0.219        
cufflinks 0.012     Low Low
cufflinks 0.632        
cufflinks 0.092     Low  
cufflinks 0.513        
cufflinks 0.164        
cufflinks 0.336        

0 Strain