Gene : Medtr1g115400 M. truncatula Mt4.0v1
Defline:  (1 of 860) PF00646 - F-box domain Description:  F-box plant-like protein
Genomic Order:  6576 Name:  ? Medtr1g115400
Secondary Identifier:  ? PAC:31092727
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g115400 0.5kb upstream 0.5kb upstream 2705 true chr1: 52096685-52099389 Medicago truncatula
Medtr1g115400 0.5kb upstream 0.5kb upstream 500 false chr1: 52098890-52099389 Medicago truncatula
Medtr1g115400 0.5kb downstream 0.5kb downstream 2705 true chr1: 52096185-52098889 Medicago truncatula
Medtr1g115400 0.5kb downstream 0.5kb downstream 500 false chr1: 52096185-52096684 Medicago truncatula
Medtr1g115400 1.0kb upstream 1.0kb upstream 3205 true chr1: 52096685-52099889 Medicago truncatula
Medtr1g115400 1.0kb upstream 1.0kb upstream 1000 false chr1: 52098890-52099889 Medicago truncatula
Medtr1g115400 1.0kb downstream 1.0kb downstream 3205 true chr1: 52095685-52098889 Medicago truncatula
Medtr1g115400 1.0kb downstream 1.0kb downstream 1000 false chr1: 52095685-52096684 Medicago truncatula
Medtr1g115400 2.0kb upstream 2.0kb upstream 4205 true chr1: 52096685-52100889 Medicago truncatula
Medtr1g115400 2.0kb upstream 2.0kb upstream 2000 false chr1: 52098890-52100889 Medicago truncatula
Medtr1g115400 2.0kb downstream 2.0kb downstream 4205 true chr1: 52094685-52098889 Medicago truncatula
Medtr1g115400 2.0kb downstream 2.0kb downstream 2000 false chr1: 52094685-52096684 Medicago truncatula
Medtr1g115400 5.0kb upstream 5.0kb upstream 7205 true chr1: 52096685-52103889 Medicago truncatula
Medtr1g115400 5.0kb upstream 5.0kb upstream 5000 false chr1: 52098890-52103889 Medicago truncatula
Medtr1g115400 5.0kb downstream 5.0kb downstream 7205 true chr1: 52091685-52098889 Medicago truncatula
Medtr1g115400 5.0kb downstream 5.0kb downstream 5000 false chr1: 52091685-52096684 Medicago truncatula
Medtr1g115400 10.0kb upstream 10.0kb upstream 12205 true chr1: 52096685-52108889 Medicago truncatula
Medtr1g115400 10.0kb upstream 10.0kb upstream 10000 false chr1: 52098890-52108889 Medicago truncatula
Medtr1g115400 10.0kb downstream 10.0kb downstream 12205 true chr1: 52086685-52098889 Medicago truncatula
Medtr1g115400 10.0kb downstream 10.0kb downstream 10000 false chr1: 52086685-52096684 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309899 5265 Fabidae View MSA
124074285 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.469       High
cufflinks 0.254        
cufflinks 0.295        
cufflinks 0.888        
cufflinks 0.435        
cufflinks 0.604        
cufflinks 1.45       High
cufflinks 0.139       Low
cufflinks 0.996        

0 Strain