Gene : Medtr1g115375 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG4210 - Nuclear localization sequence binding protein Description:  RNA recognition motif, a.k.a. RRM, RBD protein
Genomic Order:  6572 Name:  ? Medtr1g115375
Secondary Identifier:  ? PAC:31094234
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g115375 0.5kb upstream 0.5kb upstream 4212 true chr1: 52071412-52075623 Medicago truncatula
Medtr1g115375 0.5kb upstream 0.5kb upstream 500 false chr1: 52075124-52075623 Medicago truncatula
Medtr1g115375 0.5kb downstream 0.5kb downstream 4212 true chr1: 52070912-52075123 Medicago truncatula
Medtr1g115375 0.5kb downstream 0.5kb downstream 500 false chr1: 52070912-52071411 Medicago truncatula
Medtr1g115375 1.0kb upstream 1.0kb upstream 4712 true chr1: 52071412-52076123 Medicago truncatula
Medtr1g115375 1.0kb upstream 1.0kb upstream 1000 false chr1: 52075124-52076123 Medicago truncatula
Medtr1g115375 1.0kb downstream 1.0kb downstream 4712 true chr1: 52070412-52075123 Medicago truncatula
Medtr1g115375 1.0kb downstream 1.0kb downstream 1000 false chr1: 52070412-52071411 Medicago truncatula
Medtr1g115375 2.0kb upstream 2.0kb upstream 5712 true chr1: 52071412-52077123 Medicago truncatula
Medtr1g115375 2.0kb upstream 2.0kb upstream 2000 false chr1: 52075124-52077123 Medicago truncatula
Medtr1g115375 2.0kb downstream 2.0kb downstream 5712 true chr1: 52069412-52075123 Medicago truncatula
Medtr1g115375 2.0kb downstream 2.0kb downstream 2000 false chr1: 52069412-52071411 Medicago truncatula
Medtr1g115375 5.0kb upstream 5.0kb upstream 8712 true chr1: 52071412-52080123 Medicago truncatula
Medtr1g115375 5.0kb upstream 5.0kb upstream 5000 false chr1: 52075124-52080123 Medicago truncatula
Medtr1g115375 5.0kb downstream 5.0kb downstream 8712 true chr1: 52066412-52075123 Medicago truncatula
Medtr1g115375 5.0kb downstream 5.0kb downstream 5000 false chr1: 52066412-52071411 Medicago truncatula
Medtr1g115375 10.0kb upstream 10.0kb upstream 13712 true chr1: 52071412-52085123 Medicago truncatula
Medtr1g115375 10.0kb upstream 10.0kb upstream 10000 false chr1: 52075124-52085123 Medicago truncatula
Medtr1g115375 10.0kb downstream 10.0kb downstream 13712 true chr1: 52061412-52075123 Medicago truncatula
Medtr1g115375 10.0kb downstream 10.0kb downstream 10000 false chr1: 52061412-52071411 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311286 5265 Fabidae View MSA
124069375 5270 Rosid View MSA
123748314 5271 Pentapetalae View MSA
122791065 5272 Eudicot View MSA
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.216        
cufflinks 3.122        
cufflinks 3.891        
cufflinks 1.232       Low
cufflinks 4.606       High
cufflinks 2.04        
cufflinks 2.276        
cufflinks 3.062        
cufflinks 1.55       Low

0 Strain