Gene : Medtr1g115300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12747 - IKAPPAB KINASE COMPLEX-ASSOCIATED PROTEIN Description:  elongator complex protein
Genomic Order:  6562 Name:  ? Medtr1g115300
Secondary Identifier:  ? PAC:31099473
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g115300 0.5kb upstream 0.5kb upstream 7005 true chr1: 52012222-52019226 Medicago truncatula
Medtr1g115300 0.5kb upstream 0.5kb upstream 500 false chr1: 52012222-52012721 Medicago truncatula
Medtr1g115300 0.5kb downstream 0.5kb downstream 7005 true chr1: 52012722-52019726 Medicago truncatula
Medtr1g115300 0.5kb downstream 0.5kb downstream 500 false chr1: 52019227-52019726 Medicago truncatula
Medtr1g115300 1.0kb upstream 1.0kb upstream 7505 true chr1: 52011722-52019226 Medicago truncatula
Medtr1g115300 1.0kb upstream 1.0kb upstream 1000 false chr1: 52011722-52012721 Medicago truncatula
Medtr1g115300 1.0kb downstream 1.0kb downstream 7505 true chr1: 52012722-52020226 Medicago truncatula
Medtr1g115300 1.0kb downstream 1.0kb downstream 1000 false chr1: 52019227-52020226 Medicago truncatula
Medtr1g115300 2.0kb upstream 2.0kb upstream 8505 true chr1: 52010722-52019226 Medicago truncatula
Medtr1g115300 2.0kb upstream 2.0kb upstream 2000 false chr1: 52010722-52012721 Medicago truncatula
Medtr1g115300 2.0kb downstream 2.0kb downstream 8505 true chr1: 52012722-52021226 Medicago truncatula
Medtr1g115300 2.0kb downstream 2.0kb downstream 2000 false chr1: 52019227-52021226 Medicago truncatula
Medtr1g115300 5.0kb upstream 5.0kb upstream 11505 true chr1: 52007722-52019226 Medicago truncatula
Medtr1g115300 5.0kb upstream 5.0kb upstream 5000 false chr1: 52007722-52012721 Medicago truncatula
Medtr1g115300 5.0kb downstream 5.0kb downstream 11505 true chr1: 52012722-52024226 Medicago truncatula
Medtr1g115300 5.0kb downstream 5.0kb downstream 5000 false chr1: 52019227-52024226 Medicago truncatula
Medtr1g115300 10.0kb upstream 10.0kb upstream 16505 true chr1: 52002722-52019226 Medicago truncatula
Medtr1g115300 10.0kb upstream 10.0kb upstream 10000 false chr1: 52002722-52012721 Medicago truncatula
Medtr1g115300 10.0kb downstream 10.0kb downstream 16505 true chr1: 52012722-52029226 Medicago truncatula
Medtr1g115300 10.0kb downstream 10.0kb downstream 10000 false chr1: 52019227-52029226 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303851 5265 Fabidae View MSA
124068354 5270 Rosid View MSA
123738975 5271 Pentapetalae View MSA
122788059 5272 Eudicot View MSA
122042004 5273 Angiosperm View MSA
121348690 5274 Embryophyte View MSA
123428735 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.437        
cufflinks 2.379        
cufflinks 2.754        
cufflinks 0.468       Low
cufflinks 3.304       High
cufflinks 0.427       Low
cufflinks 1.285        
cufflinks 2.538        
cufflinks 1.413        

0 Strain