Gene : Medtr1g116000 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  6629
Name:  ? Medtr1g116000 Secondary Identifier:  ? PAC:31095144
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g116000 0.5kb upstream 0.5kb upstream 1503 true chr1: 52419232-52420734 Medicago truncatula
Medtr1g116000 0.5kb upstream 0.5kb upstream 500 false chr1: 52420235-52420734 Medicago truncatula
Medtr1g116000 0.5kb downstream 0.5kb downstream 1503 true chr1: 52418732-52420234 Medicago truncatula
Medtr1g116000 0.5kb downstream 0.5kb downstream 500 false chr1: 52418732-52419231 Medicago truncatula
Medtr1g116000 1.0kb upstream 1.0kb upstream 2003 true chr1: 52419232-52421234 Medicago truncatula
Medtr1g116000 1.0kb upstream 1.0kb upstream 1000 false chr1: 52420235-52421234 Medicago truncatula
Medtr1g116000 1.0kb downstream 1.0kb downstream 2003 true chr1: 52418232-52420234 Medicago truncatula
Medtr1g116000 1.0kb downstream 1.0kb downstream 1000 false chr1: 52418232-52419231 Medicago truncatula
Medtr1g116000 2.0kb upstream 2.0kb upstream 3003 true chr1: 52419232-52422234 Medicago truncatula
Medtr1g116000 2.0kb upstream 2.0kb upstream 2000 false chr1: 52420235-52422234 Medicago truncatula
Medtr1g116000 2.0kb downstream 2.0kb downstream 3003 true chr1: 52417232-52420234 Medicago truncatula
Medtr1g116000 2.0kb downstream 2.0kb downstream 2000 false chr1: 52417232-52419231 Medicago truncatula
Medtr1g116000 5.0kb upstream 5.0kb upstream 6003 true chr1: 52419232-52425234 Medicago truncatula
Medtr1g116000 5.0kb upstream 5.0kb upstream 5000 false chr1: 52420235-52425234 Medicago truncatula
Medtr1g116000 5.0kb downstream 5.0kb downstream 6003 true chr1: 52414232-52420234 Medicago truncatula
Medtr1g116000 5.0kb downstream 5.0kb downstream 5000 false chr1: 52414232-52419231 Medicago truncatula
Medtr1g116000 10.0kb upstream 10.0kb upstream 11003 true chr1: 52419232-52430234 Medicago truncatula
Medtr1g116000 10.0kb upstream 10.0kb upstream 10000 false chr1: 52420235-52430234 Medicago truncatula
Medtr1g116000 10.0kb downstream 10.0kb downstream 11003 true chr1: 52409232-52420234 Medicago truncatula
Medtr1g116000 10.0kb downstream 10.0kb downstream 10000 false chr1: 52409232-52419231 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309792 5265 Fabidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.219        
cufflinks 0.229        
cufflinks 0.528        
cufflinks 0.657       High
cufflinks 0.45        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.153       Low
cufflinks 0.364        
cufflinks 0.259        

0 Strain