Gene : Medtr1g115545 M. truncatula Mt4.0v1
Defline:  (1 of 9) PTHR13872 - 60S RIBOSOMAL PROTEIN L35 Description:  60S ribosomal L35-like protein
Genomic Order:  6600 Name:  ? Medtr1g115545
Secondary Identifier:  ? PAC:31094719
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g115545 0.5kb upstream 0.5kb upstream 2676 true chr1: 52226156-52228831 Medicago truncatula
Medtr1g115545 0.5kb upstream 0.5kb upstream 500 false chr1: 52226156-52226655 Medicago truncatula
Medtr1g115545 0.5kb downstream 0.5kb downstream 2676 true chr1: 52226656-52229331 Medicago truncatula
Medtr1g115545 0.5kb downstream 0.5kb downstream 500 false chr1: 52228832-52229331 Medicago truncatula
Medtr1g115545 1.0kb upstream 1.0kb upstream 3176 true chr1: 52225656-52228831 Medicago truncatula
Medtr1g115545 1.0kb upstream 1.0kb upstream 1000 false chr1: 52225656-52226655 Medicago truncatula
Medtr1g115545 1.0kb downstream 1.0kb downstream 3176 true chr1: 52226656-52229831 Medicago truncatula
Medtr1g115545 1.0kb downstream 1.0kb downstream 1000 false chr1: 52228832-52229831 Medicago truncatula
Medtr1g115545 2.0kb upstream 2.0kb upstream 4176 true chr1: 52224656-52228831 Medicago truncatula
Medtr1g115545 2.0kb upstream 2.0kb upstream 2000 false chr1: 52224656-52226655 Medicago truncatula
Medtr1g115545 2.0kb downstream 2.0kb downstream 4176 true chr1: 52226656-52230831 Medicago truncatula
Medtr1g115545 2.0kb downstream 2.0kb downstream 2000 false chr1: 52228832-52230831 Medicago truncatula
Medtr1g115545 5.0kb upstream 5.0kb upstream 7176 true chr1: 52221656-52228831 Medicago truncatula
Medtr1g115545 5.0kb upstream 5.0kb upstream 5000 false chr1: 52221656-52226655 Medicago truncatula
Medtr1g115545 5.0kb downstream 5.0kb downstream 7176 true chr1: 52226656-52233831 Medicago truncatula
Medtr1g115545 5.0kb downstream 5.0kb downstream 5000 false chr1: 52228832-52233831 Medicago truncatula
Medtr1g115545 10.0kb upstream 10.0kb upstream 12176 true chr1: 52216656-52228831 Medicago truncatula
Medtr1g115545 10.0kb upstream 10.0kb upstream 10000 false chr1: 52216656-52226655 Medicago truncatula
Medtr1g115545 10.0kb downstream 10.0kb downstream 12176 true chr1: 52226656-52238831 Medicago truncatula
Medtr1g115545 10.0kb downstream 10.0kb downstream 10000 false chr1: 52228832-52238831 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313417 5265 Fabidae View MSA
124074061 5270 Rosid View MSA
123744654 5271 Pentapetalae View MSA
122786708 5272 Eudicot View MSA
122050445 5273 Angiosperm View MSA
121345704 5274 Embryophyte View MSA
123426654 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.215     High Low
cufflinks 17.166     High Low
cufflinks 23.337     High  
cufflinks 73.984     High High
cufflinks 35.291     High  
cufflinks 39.321     High  
cufflinks 28.587     High  
cufflinks 20.827     High  
cufflinks 41.98     High  

0 Strain