Gene : Medtr1g116210 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11909:SF146 - CASEIN KINASE-LIKE PROTEIN Description:  casein kinase I-like protein
Genomic Order:  6650 Name:  ? Medtr1g116210
Secondary Identifier:  ? PAC:31097729
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g116210 0.5kb upstream 0.5kb upstream 6029 true chr1: 52530219-52536247 Medicago truncatula
Medtr1g116210 0.5kb upstream 0.5kb upstream 500 false chr1: 52530219-52530718 Medicago truncatula
Medtr1g116210 0.5kb downstream 0.5kb downstream 6029 true chr1: 52530719-52536747 Medicago truncatula
Medtr1g116210 0.5kb downstream 0.5kb downstream 500 false chr1: 52536248-52536747 Medicago truncatula
Medtr1g116210 1.0kb upstream 1.0kb upstream 6529 true chr1: 52529719-52536247 Medicago truncatula
Medtr1g116210 1.0kb upstream 1.0kb upstream 1000 false chr1: 52529719-52530718 Medicago truncatula
Medtr1g116210 1.0kb downstream 1.0kb downstream 6529 true chr1: 52530719-52537247 Medicago truncatula
Medtr1g116210 1.0kb downstream 1.0kb downstream 1000 false chr1: 52536248-52537247 Medicago truncatula
Medtr1g116210 2.0kb upstream 2.0kb upstream 7529 true chr1: 52528719-52536247 Medicago truncatula
Medtr1g116210 2.0kb upstream 2.0kb upstream 2000 false chr1: 52528719-52530718 Medicago truncatula
Medtr1g116210 2.0kb downstream 2.0kb downstream 7529 true chr1: 52530719-52538247 Medicago truncatula
Medtr1g116210 2.0kb downstream 2.0kb downstream 2000 false chr1: 52536248-52538247 Medicago truncatula
Medtr1g116210 5.0kb upstream 5.0kb upstream 10529 true chr1: 52525719-52536247 Medicago truncatula
Medtr1g116210 5.0kb upstream 5.0kb upstream 5000 false chr1: 52525719-52530718 Medicago truncatula
Medtr1g116210 5.0kb downstream 5.0kb downstream 10529 true chr1: 52530719-52541247 Medicago truncatula
Medtr1g116210 5.0kb downstream 5.0kb downstream 5000 false chr1: 52536248-52541247 Medicago truncatula
Medtr1g116210 10.0kb upstream 10.0kb upstream 15529 true chr1: 52520719-52536247 Medicago truncatula
Medtr1g116210 10.0kb upstream 10.0kb upstream 10000 false chr1: 52520719-52530718 Medicago truncatula
Medtr1g116210 10.0kb downstream 10.0kb downstream 15529 true chr1: 52530719-52546247 Medicago truncatula
Medtr1g116210 10.0kb downstream 10.0kb downstream 10000 false chr1: 52536248-52546247 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297994 5265 Fabidae View MSA
124060485 5270 Rosid View MSA
123746473 5271 Pentapetalae View MSA
122796123 5272 Eudicot View MSA
122047943 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.143        
cufflinks 16.265     High  
cufflinks 18.635     High High
cufflinks 8.175        
cufflinks 18.829     High High
cufflinks 5.132       Low
cufflinks 9.783        
cufflinks 15.327     High  
cufflinks 9.626        

0 Strain