Gene : Medtr1g116110 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11048:SF3 - PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL Description:  protoheme IX farnesyltransferase
Genomic Order:  6641 Name:  ? Medtr1g116110
Secondary Identifier:  ? PAC:31092910
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g116110 0.5kb upstream 0.5kb upstream 4821 true chr1: 52479031-52483851 Medicago truncatula
Medtr1g116110 0.5kb upstream 0.5kb upstream 500 false chr1: 52483352-52483851 Medicago truncatula
Medtr1g116110 0.5kb downstream 0.5kb downstream 4821 true chr1: 52478531-52483351 Medicago truncatula
Medtr1g116110 0.5kb downstream 0.5kb downstream 500 false chr1: 52478531-52479030 Medicago truncatula
Medtr1g116110 1.0kb upstream 1.0kb upstream 5321 true chr1: 52479031-52484351 Medicago truncatula
Medtr1g116110 1.0kb upstream 1.0kb upstream 1000 false chr1: 52483352-52484351 Medicago truncatula
Medtr1g116110 1.0kb downstream 1.0kb downstream 5321 true chr1: 52478031-52483351 Medicago truncatula
Medtr1g116110 1.0kb downstream 1.0kb downstream 1000 false chr1: 52478031-52479030 Medicago truncatula
Medtr1g116110 2.0kb upstream 2.0kb upstream 6321 true chr1: 52479031-52485351 Medicago truncatula
Medtr1g116110 2.0kb upstream 2.0kb upstream 2000 false chr1: 52483352-52485351 Medicago truncatula
Medtr1g116110 2.0kb downstream 2.0kb downstream 6321 true chr1: 52477031-52483351 Medicago truncatula
Medtr1g116110 2.0kb downstream 2.0kb downstream 2000 false chr1: 52477031-52479030 Medicago truncatula
Medtr1g116110 5.0kb upstream 5.0kb upstream 9321 true chr1: 52479031-52488351 Medicago truncatula
Medtr1g116110 5.0kb upstream 5.0kb upstream 5000 false chr1: 52483352-52488351 Medicago truncatula
Medtr1g116110 5.0kb downstream 5.0kb downstream 9321 true chr1: 52474031-52483351 Medicago truncatula
Medtr1g116110 5.0kb downstream 5.0kb downstream 5000 false chr1: 52474031-52479030 Medicago truncatula
Medtr1g116110 10.0kb upstream 10.0kb upstream 14321 true chr1: 52479031-52493351 Medicago truncatula
Medtr1g116110 10.0kb upstream 10.0kb upstream 10000 false chr1: 52483352-52493351 Medicago truncatula
Medtr1g116110 10.0kb downstream 10.0kb downstream 14321 true chr1: 52469031-52483351 Medicago truncatula
Medtr1g116110 10.0kb downstream 10.0kb downstream 10000 false chr1: 52469031-52479030 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315294 5265 Fabidae View MSA
124065893 5270 Rosid View MSA
123737937 5271 Pentapetalae View MSA
122790266 5272 Eudicot View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.507       Low
cufflinks 2.556        
cufflinks 2.313        
cufflinks 4.086       High
cufflinks 2.852        
cufflinks 3.366        
cufflinks 1.613       Low
cufflinks 2.299        
cufflinks 2.622        

0 Strain