Gene : Medtr2g044920 M. truncatula Mt4.0v1
Defline:  (1 of 12) PTHR12899 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL Description:  50S ribosomal protein L18
Genomic Order:  2667 Name:  ? Medtr2g044920
Secondary Identifier:  ? PAC:31062750
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g044920 0.5kb upstream 0.5kb upstream 4298 true chr2: 19533306-19537603 Medicago truncatula
Medtr2g044920 0.5kb upstream 0.5kb upstream 500 false chr2: 19537104-19537603 Medicago truncatula
Medtr2g044920 0.5kb downstream 0.5kb downstream 4298 true chr2: 19532806-19537103 Medicago truncatula
Medtr2g044920 0.5kb downstream 0.5kb downstream 500 false chr2: 19532806-19533305 Medicago truncatula
Medtr2g044920 1.0kb upstream 1.0kb upstream 4798 true chr2: 19533306-19538103 Medicago truncatula
Medtr2g044920 1.0kb upstream 1.0kb upstream 1000 false chr2: 19537104-19538103 Medicago truncatula
Medtr2g044920 1.0kb downstream 1.0kb downstream 4798 true chr2: 19532306-19537103 Medicago truncatula
Medtr2g044920 1.0kb downstream 1.0kb downstream 1000 false chr2: 19532306-19533305 Medicago truncatula
Medtr2g044920 2.0kb upstream 2.0kb upstream 5798 true chr2: 19533306-19539103 Medicago truncatula
Medtr2g044920 2.0kb upstream 2.0kb upstream 2000 false chr2: 19537104-19539103 Medicago truncatula
Medtr2g044920 2.0kb downstream 2.0kb downstream 5798 true chr2: 19531306-19537103 Medicago truncatula
Medtr2g044920 2.0kb downstream 2.0kb downstream 2000 false chr2: 19531306-19533305 Medicago truncatula
Medtr2g044920 5.0kb upstream 5.0kb upstream 8798 true chr2: 19533306-19542103 Medicago truncatula
Medtr2g044920 5.0kb upstream 5.0kb upstream 5000 false chr2: 19537104-19542103 Medicago truncatula
Medtr2g044920 5.0kb downstream 5.0kb downstream 8798 true chr2: 19528306-19537103 Medicago truncatula
Medtr2g044920 5.0kb downstream 5.0kb downstream 5000 false chr2: 19528306-19533305 Medicago truncatula
Medtr2g044920 10.0kb upstream 10.0kb upstream 13798 true chr2: 19533306-19547103 Medicago truncatula
Medtr2g044920 10.0kb upstream 10.0kb upstream 10000 false chr2: 19537104-19547103 Medicago truncatula
Medtr2g044920 10.0kb downstream 10.0kb downstream 13798 true chr2: 19523306-19537103 Medicago truncatula
Medtr2g044920 10.0kb downstream 10.0kb downstream 10000 false chr2: 19523306-19533305 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303707 5265 Fabidae View MSA
124064219 5270 Rosid View MSA
123746158 5271 Pentapetalae View MSA
122789168 5272 Eudicot View MSA
122046996 5273 Angiosperm View MSA
121350781 5274 Embryophyte View MSA
123423914 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.718       Low
cufflinks 20.573     High High
cufflinks 16.727     High  
cufflinks 1.272        
cufflinks 21.811     High High
cufflinks 0.834        
cufflinks 1.217        
cufflinks 22.381     High High
cufflinks 1.117        

0 Strain