Gene : Medtr2g044600 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12459:SF6 - TRANSMEMBRANE PROTEIN Description:  hypothetical protein
Genomic Order:  2655 Name:  ? Medtr2g044600
Secondary Identifier:  ? PAC:31066854
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g044600 0.5kb upstream 0.5kb upstream 6487 true chr2: 19369397-19375883 Medicago truncatula
Medtr2g044600 0.5kb upstream 0.5kb upstream 500 false chr2: 19375384-19375883 Medicago truncatula
Medtr2g044600 0.5kb downstream 0.5kb downstream 6487 true chr2: 19368897-19375383 Medicago truncatula
Medtr2g044600 0.5kb downstream 0.5kb downstream 500 false chr2: 19368897-19369396 Medicago truncatula
Medtr2g044600 1.0kb upstream 1.0kb upstream 6987 true chr2: 19369397-19376383 Medicago truncatula
Medtr2g044600 1.0kb upstream 1.0kb upstream 1000 false chr2: 19375384-19376383 Medicago truncatula
Medtr2g044600 1.0kb downstream 1.0kb downstream 6987 true chr2: 19368397-19375383 Medicago truncatula
Medtr2g044600 1.0kb downstream 1.0kb downstream 1000 false chr2: 19368397-19369396 Medicago truncatula
Medtr2g044600 2.0kb upstream 2.0kb upstream 7987 true chr2: 19369397-19377383 Medicago truncatula
Medtr2g044600 2.0kb upstream 2.0kb upstream 2000 false chr2: 19375384-19377383 Medicago truncatula
Medtr2g044600 2.0kb downstream 2.0kb downstream 7987 true chr2: 19367397-19375383 Medicago truncatula
Medtr2g044600 2.0kb downstream 2.0kb downstream 2000 false chr2: 19367397-19369396 Medicago truncatula
Medtr2g044600 5.0kb upstream 5.0kb upstream 10987 true chr2: 19369397-19380383 Medicago truncatula
Medtr2g044600 5.0kb upstream 5.0kb upstream 5000 false chr2: 19375384-19380383 Medicago truncatula
Medtr2g044600 5.0kb downstream 5.0kb downstream 10987 true chr2: 19364397-19375383 Medicago truncatula
Medtr2g044600 5.0kb downstream 5.0kb downstream 5000 false chr2: 19364397-19369396 Medicago truncatula
Medtr2g044600 10.0kb upstream 10.0kb upstream 15987 true chr2: 19369397-19385383 Medicago truncatula
Medtr2g044600 10.0kb upstream 10.0kb upstream 10000 false chr2: 19375384-19385383 Medicago truncatula
Medtr2g044600 10.0kb downstream 10.0kb downstream 15987 true chr2: 19359397-19375383 Medicago truncatula
Medtr2g044600 10.0kb downstream 10.0kb downstream 10000 false chr2: 19359397-19369396 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301300 5265 Fabidae View MSA
124065046 5270 Rosid View MSA
123736440 5271 Pentapetalae View MSA
122793822 5272 Eudicot View MSA
122042265 5273 Angiosperm View MSA
121346906 5274 Embryophyte View MSA
123424651 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.057        
cufflinks 2.163        
cufflinks 4.549       High
cufflinks 0.667        
cufflinks 2.471        
cufflinks 0.129     Low Low
cufflinks 0.869        
cufflinks 3.121        
cufflinks 0.848        

0 Strain