Gene : Medtr2g044580 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG0721 - Molecular chaperone (DnaJ superfamily) Description:  DnaJ heat shock family protein
Genomic Order:  2654 Name:  ? Medtr2g044580
Secondary Identifier:  ? PAC:31069058
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g044580 0.5kb upstream 0.5kb upstream 6725 true chr2: 19359568-19366292 Medicago truncatula
Medtr2g044580 0.5kb upstream 0.5kb upstream 500 false chr2: 19359568-19360067 Medicago truncatula
Medtr2g044580 0.5kb downstream 0.5kb downstream 6725 true chr2: 19360068-19366792 Medicago truncatula
Medtr2g044580 0.5kb downstream 0.5kb downstream 500 false chr2: 19366293-19366792 Medicago truncatula
Medtr2g044580 1.0kb upstream 1.0kb upstream 7225 true chr2: 19359068-19366292 Medicago truncatula
Medtr2g044580 1.0kb upstream 1.0kb upstream 1000 false chr2: 19359068-19360067 Medicago truncatula
Medtr2g044580 1.0kb downstream 1.0kb downstream 7225 true chr2: 19360068-19367292 Medicago truncatula
Medtr2g044580 1.0kb downstream 1.0kb downstream 1000 false chr2: 19366293-19367292 Medicago truncatula
Medtr2g044580 2.0kb upstream 2.0kb upstream 8225 true chr2: 19358068-19366292 Medicago truncatula
Medtr2g044580 2.0kb upstream 2.0kb upstream 2000 false chr2: 19358068-19360067 Medicago truncatula
Medtr2g044580 2.0kb downstream 2.0kb downstream 8225 true chr2: 19360068-19368292 Medicago truncatula
Medtr2g044580 2.0kb downstream 2.0kb downstream 2000 false chr2: 19366293-19368292 Medicago truncatula
Medtr2g044580 5.0kb upstream 5.0kb upstream 11225 true chr2: 19355068-19366292 Medicago truncatula
Medtr2g044580 5.0kb upstream 5.0kb upstream 5000 false chr2: 19355068-19360067 Medicago truncatula
Medtr2g044580 5.0kb downstream 5.0kb downstream 11225 true chr2: 19360068-19371292 Medicago truncatula
Medtr2g044580 5.0kb downstream 5.0kb downstream 5000 false chr2: 19366293-19371292 Medicago truncatula
Medtr2g044580 10.0kb upstream 10.0kb upstream 16225 true chr2: 19350068-19366292 Medicago truncatula
Medtr2g044580 10.0kb upstream 10.0kb upstream 10000 false chr2: 19350068-19360067 Medicago truncatula
Medtr2g044580 10.0kb downstream 10.0kb downstream 16225 true chr2: 19360068-19376292 Medicago truncatula
Medtr2g044580 10.0kb downstream 10.0kb downstream 10000 false chr2: 19366293-19376292 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303454 5265 Fabidae View MSA
124068624 5270 Rosid View MSA
123750778 5271 Pentapetalae View MSA
122790438 5272 Eudicot View MSA
122042365 5273 Angiosperm View MSA
121347145 5274 Embryophyte View MSA
123426630 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.269       High
cufflinks 4.94        
cufflinks 6.433        
cufflinks 3.594        
cufflinks 5.537        
cufflinks 1.944       Low
cufflinks 4.152        
cufflinks 5.473        
cufflinks 4.148        

0 Strain