Gene : Medtr2g045235 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF14968 - Coiled coil protein 84 (CCDC84) Description:  hypothetical protein
Genomic Order:  2696 Name:  ? Medtr2g045235
Secondary Identifier:  ? PAC:31067865
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g045235 0.5kb upstream 0.5kb upstream 1762 true chr2: 19864055-19865816 Medicago truncatula
Medtr2g045235 0.5kb upstream 0.5kb upstream 500 false chr2: 19864055-19864554 Medicago truncatula
Medtr2g045235 0.5kb downstream 0.5kb downstream 1762 true chr2: 19864555-19866316 Medicago truncatula
Medtr2g045235 0.5kb downstream 0.5kb downstream 500 false chr2: 19865817-19866316 Medicago truncatula
Medtr2g045235 1.0kb upstream 1.0kb upstream 2262 true chr2: 19863555-19865816 Medicago truncatula
Medtr2g045235 1.0kb upstream 1.0kb upstream 1000 false chr2: 19863555-19864554 Medicago truncatula
Medtr2g045235 1.0kb downstream 1.0kb downstream 2262 true chr2: 19864555-19866816 Medicago truncatula
Medtr2g045235 1.0kb downstream 1.0kb downstream 1000 false chr2: 19865817-19866816 Medicago truncatula
Medtr2g045235 2.0kb upstream 2.0kb upstream 3262 true chr2: 19862555-19865816 Medicago truncatula
Medtr2g045235 2.0kb upstream 2.0kb upstream 2000 false chr2: 19862555-19864554 Medicago truncatula
Medtr2g045235 2.0kb downstream 2.0kb downstream 3262 true chr2: 19864555-19867816 Medicago truncatula
Medtr2g045235 2.0kb downstream 2.0kb downstream 2000 false chr2: 19865817-19867816 Medicago truncatula
Medtr2g045235 5.0kb upstream 5.0kb upstream 6262 true chr2: 19859555-19865816 Medicago truncatula
Medtr2g045235 5.0kb upstream 5.0kb upstream 5000 false chr2: 19859555-19864554 Medicago truncatula
Medtr2g045235 5.0kb downstream 5.0kb downstream 6262 true chr2: 19864555-19870816 Medicago truncatula
Medtr2g045235 5.0kb downstream 5.0kb downstream 5000 false chr2: 19865817-19870816 Medicago truncatula
Medtr2g045235 10.0kb upstream 10.0kb upstream 11262 true chr2: 19854555-19865816 Medicago truncatula
Medtr2g045235 10.0kb upstream 10.0kb upstream 10000 false chr2: 19854555-19864554 Medicago truncatula
Medtr2g045235 10.0kb downstream 10.0kb downstream 11262 true chr2: 19864555-19875816 Medicago truncatula
Medtr2g045235 10.0kb downstream 10.0kb downstream 10000 false chr2: 19865817-19875816 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657201 5273 Angiosperm View MSA
122258888 5265 Fabidae Singleton cluster - no MSA
124038615 5270 Rosid View MSA
123610896 5271 Pentapetalae View MSA
122645485 5272 Eudicot View MSA
120929246 5274 Embryophyte View MSA
122969815 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.015     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low High
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain