Gene : Medtr2g047140 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF08288 - PIGA (GPI anchor biosynthesis) (PIGA) Description:  PIGA (GPI anchor biosynthesis) protein
Genomic Order:  2784 Name:  ? Medtr2g047140
Secondary Identifier:  ? PAC:31064234
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g047140 0.5kb upstream 0.5kb upstream 4552 true chr2: 20681059-20685610 Medicago truncatula
Medtr2g047140 0.5kb upstream 0.5kb upstream 500 false chr2: 20681059-20681558 Medicago truncatula
Medtr2g047140 0.5kb downstream 0.5kb downstream 4552 true chr2: 20681559-20686110 Medicago truncatula
Medtr2g047140 0.5kb downstream 0.5kb downstream 500 false chr2: 20685611-20686110 Medicago truncatula
Medtr2g047140 1.0kb upstream 1.0kb upstream 5052 true chr2: 20680559-20685610 Medicago truncatula
Medtr2g047140 1.0kb upstream 1.0kb upstream 1000 false chr2: 20680559-20681558 Medicago truncatula
Medtr2g047140 1.0kb downstream 1.0kb downstream 5052 true chr2: 20681559-20686610 Medicago truncatula
Medtr2g047140 1.0kb downstream 1.0kb downstream 1000 false chr2: 20685611-20686610 Medicago truncatula
Medtr2g047140 2.0kb upstream 2.0kb upstream 6052 true chr2: 20679559-20685610 Medicago truncatula
Medtr2g047140 2.0kb upstream 2.0kb upstream 2000 false chr2: 20679559-20681558 Medicago truncatula
Medtr2g047140 2.0kb downstream 2.0kb downstream 6052 true chr2: 20681559-20687610 Medicago truncatula
Medtr2g047140 2.0kb downstream 2.0kb downstream 2000 false chr2: 20685611-20687610 Medicago truncatula
Medtr2g047140 5.0kb upstream 5.0kb upstream 9052 true chr2: 20676559-20685610 Medicago truncatula
Medtr2g047140 5.0kb upstream 5.0kb upstream 5000 false chr2: 20676559-20681558 Medicago truncatula
Medtr2g047140 5.0kb downstream 5.0kb downstream 9052 true chr2: 20681559-20690610 Medicago truncatula
Medtr2g047140 5.0kb downstream 5.0kb downstream 5000 false chr2: 20685611-20690610 Medicago truncatula
Medtr2g047140 10.0kb upstream 10.0kb upstream 14052 true chr2: 20671559-20685610 Medicago truncatula
Medtr2g047140 10.0kb upstream 10.0kb upstream 10000 false chr2: 20671559-20681558 Medicago truncatula
Medtr2g047140 10.0kb downstream 10.0kb downstream 14052 true chr2: 20681559-20695610 Medicago truncatula
Medtr2g047140 10.0kb downstream 10.0kb downstream 10000 false chr2: 20685611-20695610 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121620527 5273 Angiosperm Singleton cluster - no MSA
122257969 5265 Fabidae Singleton cluster - no MSA
123999497 5270 Rosid Singleton cluster - no MSA
123573760 5271 Pentapetalae Singleton cluster - no MSA
122608480 5272 Eudicot Singleton cluster - no MSA
120892631 5274 Embryophyte Singleton cluster - no MSA
122933286 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain