Gene : Medtr2g046810 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR34790:SF1 - PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC Description:  photosystem II core complex protein psbY, putative
Genomic Order:  2764 Name:  ? Medtr2g046810
Secondary Identifier:  ? PAC:31065034
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g046810 0.5kb upstream 0.5kb upstream 965 true chr2: 20580738-20581702 Medicago truncatula
Medtr2g046810 0.5kb upstream 0.5kb upstream 500 false chr2: 20581203-20581702 Medicago truncatula
Medtr2g046810 0.5kb downstream 0.5kb downstream 965 true chr2: 20580238-20581202 Medicago truncatula
Medtr2g046810 0.5kb downstream 0.5kb downstream 500 false chr2: 20580238-20580737 Medicago truncatula
Medtr2g046810 1.0kb upstream 1.0kb upstream 1465 true chr2: 20580738-20582202 Medicago truncatula
Medtr2g046810 1.0kb upstream 1.0kb upstream 1000 false chr2: 20581203-20582202 Medicago truncatula
Medtr2g046810 1.0kb downstream 1.0kb downstream 1465 true chr2: 20579738-20581202 Medicago truncatula
Medtr2g046810 1.0kb downstream 1.0kb downstream 1000 false chr2: 20579738-20580737 Medicago truncatula
Medtr2g046810 2.0kb upstream 2.0kb upstream 2465 true chr2: 20580738-20583202 Medicago truncatula
Medtr2g046810 2.0kb upstream 2.0kb upstream 2000 false chr2: 20581203-20583202 Medicago truncatula
Medtr2g046810 2.0kb downstream 2.0kb downstream 2465 true chr2: 20578738-20581202 Medicago truncatula
Medtr2g046810 2.0kb downstream 2.0kb downstream 2000 false chr2: 20578738-20580737 Medicago truncatula
Medtr2g046810 5.0kb upstream 5.0kb upstream 5465 true chr2: 20580738-20586202 Medicago truncatula
Medtr2g046810 5.0kb upstream 5.0kb upstream 5000 false chr2: 20581203-20586202 Medicago truncatula
Medtr2g046810 5.0kb downstream 5.0kb downstream 5465 true chr2: 20575738-20581202 Medicago truncatula
Medtr2g046810 5.0kb downstream 5.0kb downstream 5000 false chr2: 20575738-20580737 Medicago truncatula
Medtr2g046810 10.0kb upstream 10.0kb upstream 10465 true chr2: 20580738-20591202 Medicago truncatula
Medtr2g046810 10.0kb upstream 10.0kb upstream 10000 false chr2: 20581203-20591202 Medicago truncatula
Medtr2g046810 10.0kb downstream 10.0kb downstream 10465 true chr2: 20570738-20581202 Medicago truncatula
Medtr2g046810 10.0kb downstream 10.0kb downstream 10000 false chr2: 20570738-20580737 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300647 5265 Fabidae View MSA
124068149 5270 Rosid View MSA
123737018 5271 Pentapetalae View MSA
122795977 5272 Eudicot View MSA
122044260 5273 Angiosperm View MSA
121349394 5274 Embryophyte View MSA
123426328 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain