Gene : Medtr2g049340 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF05512 - AWPM-19-like family (AWPM-19) Description:  ABA induced plasma membrane protein
Genomic Order:  2883 Name:  ? Medtr2g049340
Secondary Identifier:  ? PAC:31062760
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g049340 0.5kb upstream 0.5kb upstream 2210 true chr2: 21742691-21744900 Medicago truncatula
Medtr2g049340 0.5kb upstream 0.5kb upstream 500 false chr2: 21744401-21744900 Medicago truncatula
Medtr2g049340 0.5kb downstream 0.5kb downstream 2210 true chr2: 21742191-21744400 Medicago truncatula
Medtr2g049340 0.5kb downstream 0.5kb downstream 500 false chr2: 21742191-21742690 Medicago truncatula
Medtr2g049340 1.0kb upstream 1.0kb upstream 2710 true chr2: 21742691-21745400 Medicago truncatula
Medtr2g049340 1.0kb upstream 1.0kb upstream 1000 false chr2: 21744401-21745400 Medicago truncatula
Medtr2g049340 1.0kb downstream 1.0kb downstream 2710 true chr2: 21741691-21744400 Medicago truncatula
Medtr2g049340 1.0kb downstream 1.0kb downstream 1000 false chr2: 21741691-21742690 Medicago truncatula
Medtr2g049340 2.0kb upstream 2.0kb upstream 3710 true chr2: 21742691-21746400 Medicago truncatula
Medtr2g049340 2.0kb upstream 2.0kb upstream 2000 false chr2: 21744401-21746400 Medicago truncatula
Medtr2g049340 2.0kb downstream 2.0kb downstream 3710 true chr2: 21740691-21744400 Medicago truncatula
Medtr2g049340 2.0kb downstream 2.0kb downstream 2000 false chr2: 21740691-21742690 Medicago truncatula
Medtr2g049340 5.0kb upstream 5.0kb upstream 6710 true chr2: 21742691-21749400 Medicago truncatula
Medtr2g049340 5.0kb upstream 5.0kb upstream 5000 false chr2: 21744401-21749400 Medicago truncatula
Medtr2g049340 5.0kb downstream 5.0kb downstream 6710 true chr2: 21737691-21744400 Medicago truncatula
Medtr2g049340 5.0kb downstream 5.0kb downstream 5000 false chr2: 21737691-21742690 Medicago truncatula
Medtr2g049340 10.0kb upstream 10.0kb upstream 11710 true chr2: 21742691-21754400 Medicago truncatula
Medtr2g049340 10.0kb upstream 10.0kb upstream 10000 false chr2: 21744401-21754400 Medicago truncatula
Medtr2g049340 10.0kb downstream 10.0kb downstream 11710 true chr2: 21732691-21744400 Medicago truncatula
Medtr2g049340 10.0kb downstream 10.0kb downstream 10000 false chr2: 21732691-21742690 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310480 5265 Fabidae View MSA
124067384 5270 Rosid View MSA
123740214 5271 Pentapetalae View MSA
122788901 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.717       Low
cufflinks 3.272        
cufflinks 3.725        
cufflinks 17.241     High High
cufflinks 4.125        
cufflinks 8.912        
cufflinks 12.715     High  
cufflinks 4.056        
cufflinks 14.375     High  

0 Strain