Gene : Medtr2g048520 M. truncatula Mt4.0v1
Description:  hydroxyproline-rich glycoprotein family protein Genomic Order:  2842
Name:  ? Medtr2g048520 Secondary Identifier:  ? PAC:31062156
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g048520 0.5kb upstream 0.5kb upstream 1112 true chr2: 21392184-21393295 Medicago truncatula
Medtr2g048520 0.5kb upstream 0.5kb upstream 500 false chr2: 21392184-21392683 Medicago truncatula
Medtr2g048520 0.5kb downstream 0.5kb downstream 1112 true chr2: 21392684-21393795 Medicago truncatula
Medtr2g048520 0.5kb downstream 0.5kb downstream 500 false chr2: 21393296-21393795 Medicago truncatula
Medtr2g048520 1.0kb upstream 1.0kb upstream 1612 true chr2: 21391684-21393295 Medicago truncatula
Medtr2g048520 1.0kb upstream 1.0kb upstream 1000 false chr2: 21391684-21392683 Medicago truncatula
Medtr2g048520 1.0kb downstream 1.0kb downstream 1612 true chr2: 21392684-21394295 Medicago truncatula
Medtr2g048520 1.0kb downstream 1.0kb downstream 1000 false chr2: 21393296-21394295 Medicago truncatula
Medtr2g048520 2.0kb upstream 2.0kb upstream 2612 true chr2: 21390684-21393295 Medicago truncatula
Medtr2g048520 2.0kb upstream 2.0kb upstream 2000 false chr2: 21390684-21392683 Medicago truncatula
Medtr2g048520 2.0kb downstream 2.0kb downstream 2612 true chr2: 21392684-21395295 Medicago truncatula
Medtr2g048520 2.0kb downstream 2.0kb downstream 2000 false chr2: 21393296-21395295 Medicago truncatula
Medtr2g048520 5.0kb upstream 5.0kb upstream 5612 true chr2: 21387684-21393295 Medicago truncatula
Medtr2g048520 5.0kb upstream 5.0kb upstream 5000 false chr2: 21387684-21392683 Medicago truncatula
Medtr2g048520 5.0kb downstream 5.0kb downstream 5612 true chr2: 21392684-21398295 Medicago truncatula
Medtr2g048520 5.0kb downstream 5.0kb downstream 5000 false chr2: 21393296-21398295 Medicago truncatula
Medtr2g048520 10.0kb upstream 10.0kb upstream 10612 true chr2: 21382684-21393295 Medicago truncatula
Medtr2g048520 10.0kb upstream 10.0kb upstream 10000 false chr2: 21382684-21392683 Medicago truncatula
Medtr2g048520 10.0kb downstream 10.0kb downstream 10612 true chr2: 21392684-21403295 Medicago truncatula
Medtr2g048520 10.0kb downstream 10.0kb downstream 10000 false chr2: 21393296-21403295 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314966 5265 Fabidae View MSA
124070104 5270 Rosid View MSA
123744296 5271 Pentapetalae View MSA
122797193 5272 Eudicot View MSA
122048849 5273 Angiosperm View MSA
121347660 5274 Embryophyte View MSA
123380593 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain