Gene : Medtr2g048510 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11827 - SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS Description:  cation-chloride cotransporter
Genomic Order:  2841 Name:  ? Medtr2g048510
Secondary Identifier:  ? PAC:31063317
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g048510 0.5kb upstream 0.5kb upstream 19214 true chr2: 21370616-21389829 Medicago truncatula
Medtr2g048510 0.5kb upstream 0.5kb upstream 500 false chr2: 21370616-21371115 Medicago truncatula
Medtr2g048510 0.5kb downstream 0.5kb downstream 19214 true chr2: 21371116-21390329 Medicago truncatula
Medtr2g048510 0.5kb downstream 0.5kb downstream 500 false chr2: 21389830-21390329 Medicago truncatula
Medtr2g048510 1.0kb upstream 1.0kb upstream 19714 true chr2: 21370116-21389829 Medicago truncatula
Medtr2g048510 1.0kb upstream 1.0kb upstream 1000 false chr2: 21370116-21371115 Medicago truncatula
Medtr2g048510 1.0kb downstream 1.0kb downstream 19714 true chr2: 21371116-21390829 Medicago truncatula
Medtr2g048510 1.0kb downstream 1.0kb downstream 1000 false chr2: 21389830-21390829 Medicago truncatula
Medtr2g048510 2.0kb upstream 2.0kb upstream 20714 true chr2: 21369116-21389829 Medicago truncatula
Medtr2g048510 2.0kb upstream 2.0kb upstream 2000 false chr2: 21369116-21371115 Medicago truncatula
Medtr2g048510 2.0kb downstream 2.0kb downstream 20714 true chr2: 21371116-21391829 Medicago truncatula
Medtr2g048510 2.0kb downstream 2.0kb downstream 2000 false chr2: 21389830-21391829 Medicago truncatula
Medtr2g048510 5.0kb upstream 5.0kb upstream 23714 true chr2: 21366116-21389829 Medicago truncatula
Medtr2g048510 5.0kb upstream 5.0kb upstream 5000 false chr2: 21366116-21371115 Medicago truncatula
Medtr2g048510 5.0kb downstream 5.0kb downstream 23714 true chr2: 21371116-21394829 Medicago truncatula
Medtr2g048510 5.0kb downstream 5.0kb downstream 5000 false chr2: 21389830-21394829 Medicago truncatula
Medtr2g048510 10.0kb upstream 10.0kb upstream 28714 true chr2: 21361116-21389829 Medicago truncatula
Medtr2g048510 10.0kb upstream 10.0kb upstream 10000 false chr2: 21361116-21371115 Medicago truncatula
Medtr2g048510 10.0kb downstream 10.0kb downstream 28714 true chr2: 21371116-21399829 Medicago truncatula
Medtr2g048510 10.0kb downstream 10.0kb downstream 10000 false chr2: 21389830-21399829 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307906 5265 Fabidae View MSA
124066171 5270 Rosid View MSA
123736860 5271 Pentapetalae View MSA
122786911 5272 Eudicot View MSA
122042525 5273 Angiosperm View MSA
121347955 5274 Embryophyte View MSA
123428198 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.063        
cufflinks 0.945        
cufflinks 0.79        
cufflinks 0.939        
cufflinks 1.093        
cufflinks 0.305       Low
cufflinks 1.067        
cufflinks 0.674        
cufflinks 1.146        

0 Strain