Gene : Medtr2g054370 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22603:SF24 - PROTEIN CKA-1, ISOFORM A Description:  choline/ethanolamine kinase
Genomic Order:  3023 Name:  ? Medtr2g054370
Secondary Identifier:  ? PAC:31064848
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3385 Medicago truncatula pathologic  
Mtruncatula PWY4FS-6 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g054370 0.5kb upstream 0.5kb upstream 10392 true chr2: 23214441-23224832 Medicago truncatula
Medtr2g054370 0.5kb upstream 0.5kb upstream 500 false chr2: 23214441-23214940 Medicago truncatula
Medtr2g054370 0.5kb downstream 0.5kb downstream 10392 true chr2: 23214941-23225332 Medicago truncatula
Medtr2g054370 0.5kb downstream 0.5kb downstream 500 false chr2: 23224833-23225332 Medicago truncatula
Medtr2g054370 1.0kb upstream 1.0kb upstream 10892 true chr2: 23213941-23224832 Medicago truncatula
Medtr2g054370 1.0kb upstream 1.0kb upstream 1000 false chr2: 23213941-23214940 Medicago truncatula
Medtr2g054370 1.0kb downstream 1.0kb downstream 10892 true chr2: 23214941-23225832 Medicago truncatula
Medtr2g054370 1.0kb downstream 1.0kb downstream 1000 false chr2: 23224833-23225832 Medicago truncatula
Medtr2g054370 2.0kb upstream 2.0kb upstream 11892 true chr2: 23212941-23224832 Medicago truncatula
Medtr2g054370 2.0kb upstream 2.0kb upstream 2000 false chr2: 23212941-23214940 Medicago truncatula
Medtr2g054370 2.0kb downstream 2.0kb downstream 11892 true chr2: 23214941-23226832 Medicago truncatula
Medtr2g054370 2.0kb downstream 2.0kb downstream 2000 false chr2: 23224833-23226832 Medicago truncatula
Medtr2g054370 5.0kb upstream 5.0kb upstream 14892 true chr2: 23209941-23224832 Medicago truncatula
Medtr2g054370 5.0kb upstream 5.0kb upstream 5000 false chr2: 23209941-23214940 Medicago truncatula
Medtr2g054370 5.0kb downstream 5.0kb downstream 14892 true chr2: 23214941-23229832 Medicago truncatula
Medtr2g054370 5.0kb downstream 5.0kb downstream 5000 false chr2: 23224833-23229832 Medicago truncatula
Medtr2g054370 10.0kb upstream 10.0kb upstream 19892 true chr2: 23204941-23224832 Medicago truncatula
Medtr2g054370 10.0kb upstream 10.0kb upstream 10000 false chr2: 23204941-23214940 Medicago truncatula
Medtr2g054370 10.0kb downstream 10.0kb downstream 19892 true chr2: 23214941-23234832 Medicago truncatula
Medtr2g054370 10.0kb downstream 10.0kb downstream 10000 false chr2: 23224833-23234832 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301595 5265 Fabidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.279       High
cufflinks 1.468        
cufflinks 0.67        
cufflinks 0.694        
cufflinks 1.175        
cufflinks 0.563       Low
cufflinks 1.132        
cufflinks 0.621        
cufflinks 0.913        

0 Strain