Gene : Medtr2g059790 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF02170//PF02171//PF16487//PF16488 - PAZ domain (PAZ) // Piwi domain (Piwi) // Mid domain of argonaute (ArgoMid) // Argonaute linker 2 domain (ArgoL2) Description:  eukaryotic translation initiation factor 2c, putative
Genomic Order:  3177 Name:  ? Medtr2g059790
Secondary Identifier:  ? PAC:31068052
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g059790 0.5kb upstream 0.5kb upstream 6566 true chr2: 24614181-24620746 Medicago truncatula
Medtr2g059790 0.5kb upstream 0.5kb upstream 500 false chr2: 24620247-24620746 Medicago truncatula
Medtr2g059790 0.5kb downstream 0.5kb downstream 6566 true chr2: 24613681-24620246 Medicago truncatula
Medtr2g059790 0.5kb downstream 0.5kb downstream 500 false chr2: 24613681-24614180 Medicago truncatula
Medtr2g059790 1.0kb upstream 1.0kb upstream 7066 true chr2: 24614181-24621246 Medicago truncatula
Medtr2g059790 1.0kb upstream 1.0kb upstream 1000 false chr2: 24620247-24621246 Medicago truncatula
Medtr2g059790 1.0kb downstream 1.0kb downstream 7066 true chr2: 24613181-24620246 Medicago truncatula
Medtr2g059790 1.0kb downstream 1.0kb downstream 1000 false chr2: 24613181-24614180 Medicago truncatula
Medtr2g059790 2.0kb upstream 2.0kb upstream 8066 true chr2: 24614181-24622246 Medicago truncatula
Medtr2g059790 2.0kb upstream 2.0kb upstream 2000 false chr2: 24620247-24622246 Medicago truncatula
Medtr2g059790 2.0kb downstream 2.0kb downstream 8066 true chr2: 24612181-24620246 Medicago truncatula
Medtr2g059790 2.0kb downstream 2.0kb downstream 2000 false chr2: 24612181-24614180 Medicago truncatula
Medtr2g059790 5.0kb upstream 5.0kb upstream 11066 true chr2: 24614181-24625246 Medicago truncatula
Medtr2g059790 5.0kb upstream 5.0kb upstream 5000 false chr2: 24620247-24625246 Medicago truncatula
Medtr2g059790 5.0kb downstream 5.0kb downstream 11066 true chr2: 24609181-24620246 Medicago truncatula
Medtr2g059790 5.0kb downstream 5.0kb downstream 5000 false chr2: 24609181-24614180 Medicago truncatula
Medtr2g059790 10.0kb upstream 10.0kb upstream 16066 true chr2: 24614181-24630246 Medicago truncatula
Medtr2g059790 10.0kb upstream 10.0kb upstream 10000 false chr2: 24620247-24630246 Medicago truncatula
Medtr2g059790 10.0kb downstream 10.0kb downstream 16066 true chr2: 24604181-24620246 Medicago truncatula
Medtr2g059790 10.0kb downstream 10.0kb downstream 10000 false chr2: 24604181-24614180 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029598 5273 Angiosperm View MSA
122298801 5265 Fabidae View MSA
124039386 5270 Rosid View MSA
123742974 5271 Pentapetalae View MSA
122770466 5272 Eudicot View MSA
121350103 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.005     Low  
cufflinks 0.004     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low High

0 Strain