Gene : Medtr2g059260 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR34191:SF2 - STRESS-INDUCED PROTEIN KIN1-RELATED Description:  late embryogenesis abundant protein (LEA) family protein
Genomic Order:  3159 Name:  ? Medtr2g059260
Secondary Identifier:  ? PAC:31066400
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g059260 0.5kb upstream 0.5kb upstream 1161 true chr2: 24469127-24470287 Medicago truncatula
Medtr2g059260 0.5kb upstream 0.5kb upstream 500 false chr2: 24469788-24470287 Medicago truncatula
Medtr2g059260 0.5kb downstream 0.5kb downstream 1161 true chr2: 24468627-24469787 Medicago truncatula
Medtr2g059260 0.5kb downstream 0.5kb downstream 500 false chr2: 24468627-24469126 Medicago truncatula
Medtr2g059260 1.0kb upstream 1.0kb upstream 1661 true chr2: 24469127-24470787 Medicago truncatula
Medtr2g059260 1.0kb upstream 1.0kb upstream 1000 false chr2: 24469788-24470787 Medicago truncatula
Medtr2g059260 1.0kb downstream 1.0kb downstream 1661 true chr2: 24468127-24469787 Medicago truncatula
Medtr2g059260 1.0kb downstream 1.0kb downstream 1000 false chr2: 24468127-24469126 Medicago truncatula
Medtr2g059260 2.0kb upstream 2.0kb upstream 2661 true chr2: 24469127-24471787 Medicago truncatula
Medtr2g059260 2.0kb upstream 2.0kb upstream 2000 false chr2: 24469788-24471787 Medicago truncatula
Medtr2g059260 2.0kb downstream 2.0kb downstream 2661 true chr2: 24467127-24469787 Medicago truncatula
Medtr2g059260 2.0kb downstream 2.0kb downstream 2000 false chr2: 24467127-24469126 Medicago truncatula
Medtr2g059260 5.0kb upstream 5.0kb upstream 5661 true chr2: 24469127-24474787 Medicago truncatula
Medtr2g059260 5.0kb upstream 5.0kb upstream 5000 false chr2: 24469788-24474787 Medicago truncatula
Medtr2g059260 5.0kb downstream 5.0kb downstream 5661 true chr2: 24464127-24469787 Medicago truncatula
Medtr2g059260 5.0kb downstream 5.0kb downstream 5000 false chr2: 24464127-24469126 Medicago truncatula
Medtr2g059260 10.0kb upstream 10.0kb upstream 10661 true chr2: 24469127-24479787 Medicago truncatula
Medtr2g059260 10.0kb upstream 10.0kb upstream 10000 false chr2: 24469788-24479787 Medicago truncatula
Medtr2g059260 10.0kb downstream 10.0kb downstream 10661 true chr2: 24459127-24469787 Medicago truncatula
Medtr2g059260 10.0kb downstream 10.0kb downstream 10000 false chr2: 24459127-24469126 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315337 5265 Fabidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain