Gene : Medtr2g037740 M. truncatula Mt4.0v1
Defline:  (1 of 47) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  2264 Name:  ? Medtr2g037740
Secondary Identifier:  ? PAC:31068753
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g037740 0.5kb upstream 0.5kb upstream 3972 true chr2: 16345332-16349303 Medicago truncatula
Medtr2g037740 0.5kb upstream 0.5kb upstream 500 false chr2: 16348804-16349303 Medicago truncatula
Medtr2g037740 0.5kb downstream 0.5kb downstream 3972 true chr2: 16344832-16348803 Medicago truncatula
Medtr2g037740 0.5kb downstream 0.5kb downstream 500 false chr2: 16344832-16345331 Medicago truncatula
Medtr2g037740 1.0kb upstream 1.0kb upstream 4472 true chr2: 16345332-16349803 Medicago truncatula
Medtr2g037740 1.0kb upstream 1.0kb upstream 1000 false chr2: 16348804-16349803 Medicago truncatula
Medtr2g037740 1.0kb downstream 1.0kb downstream 4472 true chr2: 16344332-16348803 Medicago truncatula
Medtr2g037740 1.0kb downstream 1.0kb downstream 1000 false chr2: 16344332-16345331 Medicago truncatula
Medtr2g037740 2.0kb upstream 2.0kb upstream 5472 true chr2: 16345332-16350803 Medicago truncatula
Medtr2g037740 2.0kb upstream 2.0kb upstream 2000 false chr2: 16348804-16350803 Medicago truncatula
Medtr2g037740 2.0kb downstream 2.0kb downstream 5472 true chr2: 16343332-16348803 Medicago truncatula
Medtr2g037740 2.0kb downstream 2.0kb downstream 2000 false chr2: 16343332-16345331 Medicago truncatula
Medtr2g037740 5.0kb upstream 5.0kb upstream 8472 true chr2: 16345332-16353803 Medicago truncatula
Medtr2g037740 5.0kb upstream 5.0kb upstream 5000 false chr2: 16348804-16353803 Medicago truncatula
Medtr2g037740 5.0kb downstream 5.0kb downstream 8472 true chr2: 16340332-16348803 Medicago truncatula
Medtr2g037740 5.0kb downstream 5.0kb downstream 5000 false chr2: 16340332-16345331 Medicago truncatula
Medtr2g037740 10.0kb upstream 10.0kb upstream 13472 true chr2: 16345332-16358803 Medicago truncatula
Medtr2g037740 10.0kb upstream 10.0kb upstream 10000 false chr2: 16348804-16358803 Medicago truncatula
Medtr2g037740 10.0kb downstream 10.0kb downstream 13472 true chr2: 16335332-16348803 Medicago truncatula
Medtr2g037740 10.0kb downstream 10.0kb downstream 10000 false chr2: 16335332-16345331 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305531 5265 Fabidae View MSA
124066554 5270 Rosid View MSA
123736416 5271 Pentapetalae View MSA
122796728 5272 Eudicot View MSA
122045085 5273 Angiosperm View MSA
121310395 5274 Embryophyte View MSA
123347889 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.685        
cufflinks 1.255        
cufflinks 2.135        
cufflinks 0.116        
cufflinks 2.958        
cufflinks 0.018     Low Low
cufflinks 0.432        
cufflinks 1.852        
cufflinks 0.315        

0 Strain