Gene : Medtr2g038030 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 Description:  DNA ligase
Genomic Order:  2288 Name:  ? Medtr2g038030
Secondary Identifier:  ? PAC:31068374
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g038030 0.5kb upstream 0.5kb upstream 15341 true chr2: 16517430-16532770 Medicago truncatula
Medtr2g038030 0.5kb upstream 0.5kb upstream 500 false chr2: 16517430-16517929 Medicago truncatula
Medtr2g038030 0.5kb downstream 0.5kb downstream 15341 true chr2: 16517930-16533270 Medicago truncatula
Medtr2g038030 0.5kb downstream 0.5kb downstream 500 false chr2: 16532771-16533270 Medicago truncatula
Medtr2g038030 1.0kb upstream 1.0kb upstream 15841 true chr2: 16516930-16532770 Medicago truncatula
Medtr2g038030 1.0kb upstream 1.0kb upstream 1000 false chr2: 16516930-16517929 Medicago truncatula
Medtr2g038030 1.0kb downstream 1.0kb downstream 15841 true chr2: 16517930-16533770 Medicago truncatula
Medtr2g038030 1.0kb downstream 1.0kb downstream 1000 false chr2: 16532771-16533770 Medicago truncatula
Medtr2g038030 2.0kb upstream 2.0kb upstream 16841 true chr2: 16515930-16532770 Medicago truncatula
Medtr2g038030 2.0kb upstream 2.0kb upstream 2000 false chr2: 16515930-16517929 Medicago truncatula
Medtr2g038030 2.0kb downstream 2.0kb downstream 16841 true chr2: 16517930-16534770 Medicago truncatula
Medtr2g038030 2.0kb downstream 2.0kb downstream 2000 false chr2: 16532771-16534770 Medicago truncatula
Medtr2g038030 5.0kb upstream 5.0kb upstream 19841 true chr2: 16512930-16532770 Medicago truncatula
Medtr2g038030 5.0kb upstream 5.0kb upstream 5000 false chr2: 16512930-16517929 Medicago truncatula
Medtr2g038030 5.0kb downstream 5.0kb downstream 19841 true chr2: 16517930-16537770 Medicago truncatula
Medtr2g038030 5.0kb downstream 5.0kb downstream 5000 false chr2: 16532771-16537770 Medicago truncatula
Medtr2g038030 10.0kb upstream 10.0kb upstream 24841 true chr2: 16507930-16532770 Medicago truncatula
Medtr2g038030 10.0kb upstream 10.0kb upstream 10000 false chr2: 16507930-16517929 Medicago truncatula
Medtr2g038030 10.0kb downstream 10.0kb downstream 24841 true chr2: 16517930-16542770 Medicago truncatula
Medtr2g038030 10.0kb downstream 10.0kb downstream 10000 false chr2: 16532771-16542770 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307515 5265 Fabidae View MSA
124066259 5270 Rosid View MSA
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.091       High
cufflinks 0.903        
cufflinks 0.926        
cufflinks 0.154       Low
cufflinks 0.582        
cufflinks 0.429        
cufflinks 0.778        
cufflinks 0.659        
cufflinks 0.601        

0 Strain